Evidence map›Paper›PMID 33941444›Full record

ArticleCytokine2021

Differential levels of IFNα subtypes in autoimmunity and viral infection.

Vincent Bondet, Mathieu P Rodero, Céline Posseme, Pierre Bost, Jérémie Decalf, Liis Haljasmägi, Nassima Bekaddour, Gillian I Rice, Vinit Upasani, Jean-Philippe Herbeuval and 15 more

Open access · hybridAbstract read
In one paragraph

Article in Cytokine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
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  6. Review
  7. Article
  8. Article
  9. Constitutive IFNα Protein Production in Bats.Frontiers in immunology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 12 institutions in 5 countries.

Vincent BondetTranslational Immunology Lab, Institut Pasteur, Paris, France.
Mathieu P RoderoChimie & Biologie, Modélisation et Immunologie pour la Thérapie (CBMIT), Université de Paris, CNRS, UMR8601, Paris, France.
Céline PossemeTranslational Immunology Lab, Institut Pasteur, Paris, France; Frontiers of Innovation in Research and Education PhD program, CRI doctoral school, Université de Paris, Paris 75005, France.
Pierre BostSystems Biology Group, Department of Computational Biology and USR 3756, Institut Pasteur and CNRS, Paris 75015, France; Sorbonne Universite, Complexite du vivant, Paris 75005, France.
Jérémie DecalfTranslational Immunology Lab, Institut Pasteur, Paris, France.
Liis HaljasmägiMolecular Pathology, Institute of Biomedicine and Translational Medicine, University of Tartu, Tartu, Estonia.
Nassima BekaddourChimie & Biologie, Modélisation et Immunologie pour la Thérapie (CBMIT), Université de Paris, CNRS, UMR8601, Paris, France.
Gillian I RiceDivision of Evolution and Genomic Sciences, School of Biological Sciences, University of Manchester, Manchester, UK; Manchester Centre for Genomic Medicine, St Mary's Hospital, Manchester University Hospitals NHS Foundation Trust, Manchester, UK.
Vinit UpasaniImmunology Unit, Institut Pasteur du Cambodge, Institut Pasteur International Network, Phnom Penh, Cambodia.
Jean-Philippe HerbeuvalChimie & Biologie, Modélisation et Immunologie pour la Thérapie (CBMIT), Université de Paris, CNRS, UMR8601, Paris, France.
John A ReynoldsCentre for Musculoskeletal Research, Division of Musculoskeletal and Dermatological Sciences, School of Biological Sciences, University of Manchester, Manchester, UK; NIHR Manchester Biomedical Research Centre, Manchester University NHS Foundation Trust, Manchester Academic Health Science Centre, The University of Manchester, Manchester, UK; Rheumatology Research Group, Institute of Inflammation and Ageing, College of Medical and Dental Sciences, University of Birmingham, Birmingham, UK; Rheumatology Department, Sandwell and West Birmingham NHS Trust, Birmingham, UK.
Tracy A BriggsDivision of Evolution and Genomic Sciences, School of Biological Sciences, University of Manchester, Manchester, UK; Manchester Centre for Genomic Medicine, St Mary's Hospital, Manchester University Hospitals NHS Foundation Trust, Manchester, UK.
Ian N BruceCentre for Musculoskeletal Research, Division of Musculoskeletal and Dermatological Sciences, School of Biological Sciences, University of Manchester, Manchester, UK; NIHR Manchester Biomedical Research Centre, Manchester University NHS Foundation Trust, Manchester Academic Health Science Centre, The University of Manchester, Manchester, UK.
Claudia MauriCentre for Rheumatology Research, Division of Medicine, University College of London, London WC1E 6JF, UK.
David IsenbergCentre for Rheumatology Research, Division of Medicine, University College of London, London WC1E 6JF, UK.
Madhvi MenonCentre for Rheumatology Research, Division of Medicine, University College of London, London WC1E 6JF, UK; Lydia Becker Institute of Immunology and Inflammation, Division of Infection, Immunity & Respiratory Medicine, School of Biological Sciences, University of Manchester, UK.
David HuntCentre for Genomic and Experimental Medicine, Medical Research Council Institute of Genetics and Molecular Medicine, The University of Edinburgh, Edinburgh, UK.
Benno SchwikowskiSystems Biology Group, Department of Computational Biology and USR 3756, Institut Pasteur and CNRS, Paris 75015, France; Sorbonne Universite, Complexite du vivant, Paris 75005, France.
Xavier MarietteRheumatology, Université Paris-Saclay, Assistance Publique-Hôpitaux de Paris (AP-HP), Hôpital Bicêtre, INSERM UMR1184, Le Kremlin-Bicetre, France.
Stanislas PolUnite d'Hépatologie, Assistance Publique-Hopitaux de Paris (AP-HP), Hopital Cochin, Paris, France.
Flore RozenbergDepartment of Virology, APHP-CUP, Université de Paris, Paris, France.
Tineke CantaertImmunology Unit, Institut Pasteur du Cambodge, Institut Pasteur International Network, Phnom Penh, Cambodia.
J Eric GottenbergFaculté de Médecine de l'Université de Strasbourg, Strasbourg, France.
Kai KisandMolecular Pathology, Institute of Biomedicine and Translational Medicine, University of Tartu, Tartu, Estonia.
Darragh DuffyTranslational Immunology Lab, Institut Pasteur, Paris, France. Electronic address: darragh.duffy@pasteur.fr.
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRUniversity of Manchester · GBInstitut Pasteur du Cambodge · KHSandwell & West Birmingham Hospitals NHS Trust · GBUniversity College London · GBUniversity of Tartu · EEHôpital Cochin · FRInserm · FRInstitute of Genetics and Cancer · GBManchester Academic Health Science Centre · GBUniversité Paris Cité · FR

Funding

Medical Research Council MR/N00583X/1Wellcome Trust 208710/Z/17/Z
6 · The paper itself

Abstract

Type I interferons are essential for host response to viral infections, while dysregulation of their response can result in autoinflammation or autoimmunity. Among IFNα (alpha) responses, 13 subtypes exist that signal through the same receptor, but have been reported to have different effector functions. However, the lack of available tools for discriminating these closely related subtypes, in particular at the protein level, has restricted the study of their differential roles in disease. We developed a digital ELISA with specificity and high sensitivity for the IFNα2 subtype. Application of this assay, in parallel with our previously described pan-IFNα assay, allowed us to study different IFNα protein responses following cellular stimulation and in diverse patient cohorts. We observed different ratios of IFNα protein responses between viral infection and autoimmune patients. This analysis also revealed a small percentage of autoimmune patients with high IFNα2 protein measurements but low pan-IFNα measurements. Correlation with an ISG score and functional activity showed that in this small sub group of patients, IFNα2 protein measurements did not reflect its biological activity. This unusual phenotype was partly explained by the presence of anti-IFNα auto-antibodies in a subset of autoimmune patients. This study reports ultrasensitive assays for the study of IFNα proteins in patient samples and highlights the insights that can be obtained from the use of multiple phenotypic readouts in translational and clinical studies.

Indexed as

AdolescentAdultAgedAntiviral AgentsAutoimmunityChildChild, PreschoolFemaleHumansInfantInterferon-alphaMaleMiddle AgedVirus DiseasesYoung AdultAntiviral AgentsInterferon-alphaAnti-IFNα autoantibodiesAutoimmunityIFN functionIFNα subtypesTLR activationViral infection

Identifiers

PMID33941444
PMCPMC7614897
OpenAlexW3135549213

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.