Evidence map›Paper›PMID 33940958›Full record

ArticleStroke2021

Long Noncoding RNA Fos Downstream Transcript Is Developmentally Dispensable but Vital for Shaping the Poststroke Functional Outcome.

Suresh L Mehta, Anil K Chokkalla, TaeHee Kim, Saivenkateshkomal Bathula, Bharath Chelluboina, Kahlilia C Morris-Blanco, Aleah Holmes, Anik Banerjee, Anjali Chauhan, Juneyoung Lee and 3 more

Abstract read
In one paragraph

Article in Stroke, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. CRISPR-Based Therapy for Ischemic Stroke: A Narrative Review.Cellular and molecular neurobiology · 2026
    Review
  5. Loss of Epitranscriptomic Modification NTranslational stroke research · 2025
    Article
  6. Review
  7. Review
  8. Review
  9. Review
  10. Post-stroke brain can be protected by modulating the lncRNA FosDT.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Male-specific roles of lincRNA inFrontiers in cell and developmental biology · 2023
    Article
  15. Article
  16. Article
  17. Epigenetic mechanisms and potential therapeutic targets in stroke.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2022
    Review
  18. Review
  19. Article
  20. Noncoding RNA crosstalk in brain health and diseases.Neurochemistry international · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Suresh L MehtaDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.
Anil K ChokkallaDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.
TaeHee KimDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.
Saivenkateshkomal BathulaDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.
Bharath ChelluboinaDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.
Kahlilia C Morris-BlancoDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.
Aleah HolmesDepartment of Neurology, University of Texas-Houston (A.H., A.B., A.C., J.L., V.R.V., L.D.M.).
Anik BanerjeeDepartment of Neurology, University of Texas-Houston (A.H., A.B., A.C., J.L., V.R.V., L.D.M.).
Anjali ChauhanDepartment of Neurology, University of Texas-Houston (A.H., A.B., A.C., J.L., V.R.V., L.D.M.).
Juneyoung LeeDepartment of Neurology, University of Texas-Houston (A.H., A.B., A.C., J.L., V.R.V., L.D.M.).
Venugopal R VennaDepartment of Neurology, University of Texas-Houston (A.H., A.B., A.C., J.L., V.R.V., L.D.M.).
Louise D McCulloughDepartment of Neurology, University of Texas-Houston (A.H., A.B., A.C., J.L., V.R.V., L.D.M.).
Raghu VemugantiDepartment of Neurological Surgery (S.L.M., A.K.C., T.K., S.B., B.C., K.C.M.-B., R.V.), University of Wisconsin-Madison.

Funding

Therapeutic Targeting of an lncRNA in Experimental Stroke Using STAIR CriteriaR01NS099531 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI VEMUGANTI, RAGHU · 2017 to 2021
$2.0M
BLRD VA IK6 BX005690NINDS NIH HHS R01 NS099531
6 · The paper itself

Abstract

Background and Purpose: Stroke induces the expression of several long noncoding RNAs in the brain. However, their functional significance in poststroke outcome is poorly understood. We recently observed that a brain-specific long noncoding RNA called Fos downstream transcript (FosDT) is induced rapidly in the rodent brain following focal ischemia. Using FosDT knockout rats, we presently evaluated the role of FosDT in poststroke brain damage. Methods: FosDT knockout rats were generated using CRISPR-Cas9 genome editing on a Sprague-Dawley background. Male and female FosDT−/− and FosDT+/+ cohorts were subjected to transient middle cerebral artery occlusion. Postischemic sensorimotor deficits were evaluated between days 1 and 7 and lesion volume on day 7 of reperfusion. The developmental expression profile of FosDT was determined with real-time polymerase chain reaction and mechanistic implications of FosDT in the ischemic brain were conducted with RNA-sequencing analysis and immunostaining of pathological markers. Results: FosDT expression is developmentally regulated, with the adult cerebral cortex showing significantly higher FosDT expression than neonates. FosDT−/− rats did not show any anomalies in growth and development, fertility, brain cytoarchitecture, and cerebral vasculature. However, when subjected to transient focal ischemia, FosDT−/− rats of both sexes showed enhanced sensorimotor recovery and reduced brain damage. RNA-sequencing analysis showed that improved poststroke functional outcome in FosDT−/− rats is partially associated with curtailed induction of inflammatory genes, reduced apoptosis, mitochondrial dysfunction, and oxidative stress. Conclusions: Our study shows that FosDT is developmentally dispensable, mechanistically important, and a functionally promising target to reduce ischemic brain damage and facilitate neurological recovery.

Indexed as

AnimalsBrainFemaleMaleProto-Oncogene Proteins c-fosRatsRats, Sprague-DawleyRats, TransgenicRecovery of FunctionRNA, Long NoncodingStrokeProto-Oncogene Proteins c-fosRNA, Long Noncodingapoptosisbraindevelopmentischemic strokelncRNAmotor functionreperfusion

Identifiers

PMID33940958
PMCPMC8238840

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.