Evidence map›Paper›PMID 33939913›Full record

ArticleJournal of chemical information and modeling2021

Elucidation of Cryptic and Allosteric Pockets within the SARS-CoV-2 Main Protease.

Terra Sztain, Rommie Amaro, J Andrew McCammon

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

  1. Fragment-Based Discovery of KLK6 and KLK7 Inhibitors.Journal of chemical information and modeling · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. MarinePharmaceuticals (Basel, Switzerland) · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. SARS-CoV-2 3CLPro Dihedral Angles Reveal Allosteric Signaling.bioRxiv : the preprint server for biology · 2024
    Article
  13. On Inactivation of the Coronavirus Main Protease.Journal of chemical information and modeling · 2024
    Article
  14. Review
  15. Acta pharmaceutica Sinica. B · 2024
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Accelerating Cryptic Pocket Discovery Using AlphaFold.Journal of chemical theory and computation · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Terra SztainDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States.ORCID 0000-0002-1327-8541
Rommie AmaroDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States.ORCID 0000-0002-9275-9553
J Andrew McCammonDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States.ORCID 0000-0003-3065-1456

Funding

THEORY OF BIOMOLECULAR DIFFUSIONR01GM031749 · NIGMS · UNIVERSITY OF HOUSTON · PI HUBER, GARY ALEXANDER, MCCAMMON, JAMES ANDREW · 1985 to 2022
$7.8M
NIGMS NIH HHS R01 GM031749
6 · The paper itself

Abstract

The SARS-CoV-2 pandemic has rapidly spread across the globe, posing an urgent health concern. Many quests to computationally identify treatments against the virus rely on

Indexed as

COVID-19SARS-CoV-2Catalytic DomainHumansMolecular Docking SimulationPeptide HydrolasesProtease InhibitorsViral ProteinsPeptide HydrolasesProtease InhibitorsViral Proteins

Identifiers

PMID33939913
PMCPMC8117783

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.