Evidence map›Paper›PMID 33936018›Full record

ArticleFrontiers in microbiology2021

Antigenic and Genetic Characterization of Swine Influenza Viruses Identified in the European Region of Russia, 2014-2020.

Daria M Danilenko, Andrey B Komissarov, Artem V Fadeev, Mikhail I Bakaev, Anna A Ivanova, Polina A Petrova, Anastasia D Vassilieva, Kseniya S Komissarova, Alyona I Zheltukhina, Nadezhda I Konovalova and 1 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The genomic landscape of swine influenza A viruses in Southeast Asia.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Article
  8. Mapping SARS-CoV-2 antigenic relationships and serological responses.bioRxiv : the preprint server for biology · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Daria M DanilenkoWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Andrey B KomissarovWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Artem V FadeevWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Mikhail I BakaevWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Anna A IvanovaWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Polina A PetrovaWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Anastasia D VassilievaWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Kseniya S KomissarovaWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Alyona I ZheltukhinaWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Nadezhda I KonovalovaWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.
Andrey V VasinWHO-Recognized National Influenza Centre (NIC), Smorodintsev Research Institute of Influenza, Ministry of Health, Saint Petersburg, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pigs have long been recognized as "mixing vessels" in which new viruses are formed by reassortment involving various influenza virus lineages (avian, animal, human). However, surveillance of swine influenza viruses only gained real significance after the 2009 pandemic. A fundamentally important point is the fact that there is still no regular surveillance of swine flu in Russia, and the role of swine viruses is underestimated since, as a rule, they do not cause serious disease in animals. Since the pig population in Russia is large, it is obvious that the lack of monitoring and insufficient study of swine influenza evolution constitutes a gap in animal influenza surveillance, not only for Russia, but globally. A 6 year joint effort enabled identification of SIV subtypes that circulate in the pig population of Russia's European geographic region. The swine influenza viruses isolated were antigenically and genetically diverse. Some were similar to human influenza viruses of A(H1N1)pdm09 and A(H3N2) subtype, while others were reassortant A(H1pdm09N2) and A(H1avN2) and were antigenically distinct from human H1N1 and H1N1pdm09 strains. Analysis of swine serum samples collected throughout the seasons showed that the number of sera positive for influenza viruses has increased in recent years. This indicates that swine populations are highly susceptible to infection with human influenza viruses. It also stresses the need for regular SIV surveillance, monitoring of viral evolution, and strengthening of pandemic preparedness.

Indexed as

HI assayreverse zoonosissequencingsurveillanceswine influenza

Identifiers

PMID33936018
PMCPMC8081852

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.