Evidence map›Paper›PMID 33934535›Full record

ArticleCancer medicine2021

The low expression of NUP62CL indicates good prognosis and high level of immune infiltration in lung adenocarcinoma.

Shiqi Ren, Wei Wang, Chenlin Zhang, Yidan Sun, Mengjing Sun, Yingjing Wang, Xiaojing Zhang, Bing Lu, Lanlan Yao

Open access · goldAbstract read
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Article in Cancer medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Shiqi RenDepartment of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, P.R. China.
Wei WangDepartment of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, P.R. China.
Chenlin ZhangDepartment of orthopaedics, Qidong Hospital of Chinese Medicine, Nantong, P.R. China.
Yidan SunFirst Teaching Hospital of Tianjin University of Traditional Chinese Medicine, Tianjin, P.R. China.
Mengjing SunDepartment of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, P.R. China.
Yingjing WangDepartment of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, P.R. China.
Xiaojing ZhangDepartment of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, P.R. China.
Bing LuDepartment of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, P.R. China.ORCID 0000-0002-2141-1322
Lanlan YaoDepartment of respiration, The Six People's Hospital of Nantong, Nantong, China.ORCID 0000-0003-0442-7143
Nantong University · CNAnyang Hospital of Traditional Chinese Medicine · CNTianjin University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A primary factor in tumor morbidity and mortality, lung adenocarcinoma (LUAD) is known to be a major subtype of lung cancer, having the lowest survival rate among all other cancers. Using The Cancer Genome Atlas (TCGA) database the relationship between the immune infiltrate and the NUP62CL was explored and the value of the NUP62CL expression in the prognosis and diagnosis LUAD was examined. Using the logistic regression and the Wilcoxon signed-rank test the relationship between the NUP62CL and the clinico-pathological features was analyzed. There was a significant correlation between the clinical stage (p = 0.005), the N (p = 0.004), and the decreased expression of NUP62CL. The prognosis of LUAD with high NUP62CL expression was revealed to be worse than that with low NUP62CL expression (p < 0.001) by the Kaplan-Meier survival analysis. The potentiality of NUP62CL to be a significant factor of prognosis for LUAD was indicated by the analyses of the multivariate and the univariate Cox regression models. In LUAD, the crucial role of recombination and maintenance of telomere as a significant pathway for NUP62CL was suggested by the Gene Set Enrichment Analysis (GSEA). To analyze the correlation between the genes and the tumor infiltrating immune cells the CIBERSORT was used. Moreover the positive correlation with the NUP62CL expression in LUAD of the infiltration level of the tumor infiltrating B lymphocytes and memory CD4+ T cells was exhibited by CIBERSORT. Therefore, NUP62CL may be a new valuable prognostic indicator for LUAD.

Indexed as

Adenocarcinoma of LungBiomarkers, TumorB-LymphocytesCD4-Positive T-LymphocytesGene Expression ProfilingGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateLung NeoplasmsLymphocytes, Tumor-InfiltratingMembrane GlycoproteinsNuclear Pore Complex ProteinsPrognosisProportional Hazards ModelsBiomarkers, TumorMembrane GlycoproteinsNuclear Pore Complex Proteinsnuclear pore protein p62GEOimmune infiltrationLUADNUP62CLprognosticTCGA

Identifiers

PMID33934535
PMCPMC8124116
OpenAlexW3158693751

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.