Evidence map›Paper›PMID 33934211›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Analysis of allelic variants of RhMLO genes in rose and functional studies on susceptibility to powdery mildew related to clade V homologs.

Peihong Fang, Paul Arens, Xintong Liu, Xin Zhang, Deepika Lakwani, Fabrice Foucher, Jérémy Clotault, Juliane Geike, Helgard Kaufmann, Thomas Debener and 3 more

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Peihong FangPlant Breeding, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Paul ArensPlant Breeding, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.ORCID http://orcid.org/0000-0003-2118-389X
Xintong LiuBeijing Key Laboratory of Development and Quality Control of Ornamental Crops, Department of Ornamental Horticulture, College of Horticulture, China Agricultural University, Beijing, 100193, China.
Xin ZhangBeijing Key Laboratory of Development and Quality Control of Ornamental Crops, Department of Ornamental Horticulture, College of Horticulture, China Agricultural University, Beijing, 100193, China.
Deepika LakwaniIRHS, Agrocampus-Ouest, INRAE, Université D'Angers, SFR 4207 QuaSaV, 49071, Beaucouzé, France.
Fabrice FoucherIRHS, Agrocampus-Ouest, INRAE, Université D'Angers, SFR 4207 QuaSaV, 49071, Beaucouzé, France.ORCID http://orcid.org/0000-0002-3693-7183
Jérémy ClotaultIRHS, Agrocampus-Ouest, INRAE, Université D'Angers, SFR 4207 QuaSaV, 49071, Beaucouzé, France.ORCID http://orcid.org/0000-0002-7678-1929
Juliane GeikeInstitute of Plant Genetics, Molecular Plant Breeding Unit, Leibniz Universität Hannover, Hannover, Germany.
Helgard KaufmannInstitute of Plant Genetics, Molecular Plant Breeding Unit, Leibniz Universität Hannover, Hannover, Germany.
Thomas DebenerInstitute of Plant Genetics, Molecular Plant Breeding Unit, Leibniz Universität Hannover, Hannover, Germany.ORCID http://orcid.org/0000-0002-2012-2246
Yuling BaiPlant Breeding, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Zhao ZhangBeijing Key Laboratory of Development and Quality Control of Ornamental Crops, Department of Ornamental Horticulture, College of Horticulture, China Agricultural University, Beijing, 100193, China. zhangzhao@cau.edu.cn.ORCID http://orcid.org/0000-0002-7323-5500
Marinus J M SmuldersPlant Breeding, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands. rene.smulders@wur.nl.ORCID http://orcid.org/0000-0002-8549-6046
China Agricultural University · CNInstitut Agro Rennes-Angers · FRLeibniz University Hannover · DEChinese Research Academy of Environmental Sciences · CNGraduate School Experimental Plant Sciences · NLWageningen University & Research · NL

Funding

National Natural Science Foundation of China (CN) 31501791Topsector Horticulture & Starting materials TU18142
6 · The paper itself

Abstract

key messageRose has 19 MLO genes. Of these, RhMLO1 and RhMLO2 were shown to be required for powdery mildew infection, which suggests their potential as susceptibility targets towards disease resistance. Powdery mildew, caused by Podosphaera pannosa, is one of the most serious and widespread fungal diseases for roses, especially in greenhouse-grown cut roses. It has been shown that certain MLO genes are involved in powdery mildew susceptibility and that loss of function in these genes in various crops leads to broad-spectrum, long-lasting resistance against this fungal disease. For this reason, these MLO genes are called susceptibility genes. We carried out a genome-wide identification of the MLO gene family in the Rosa chinensis genome, and screened for allelic variants among 22 accessions from seven different Rosa species using re-sequencing and transcriptome data. We identified 19 MLO genes in rose, of which four are candidate genes for functional homologs in clade V, which is the clade containing all dicot MLO susceptibility genes. We detected a total of 198 different allelic variants in the set of Rosa species and accessions, corresponding to 5-15 different alleles for each of the genes. Some diploid Rosa species shared alleles with tetraploid rose cultivars, consistent with the notion that diploid species have contributed to the formation of tetraploid roses. Among the four RhMLO genes in clade V, we demonstrated using expression study, virus-induced gene silencing as well as transient RNAi silencing that two of them, RhMLO1 and RhMLO2, are required for infection by P. pannosa and suggest their potential as susceptibility targets for powdery mildew resistance breeding in rose.

Indexed as

AllelesAscomycotaChromosome MappingChromosomes, PlantDisease ResistanceGene Expression Regulation, PlantPhylogenyPlant DiseasesPlant ProteinsRosaPlant Proteins

Identifiers

PMID33934211
PMCPMC8277636
OpenAlexW3157925454

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.