ArticleGenetics, selection, evolution : GSE2021
The value of genomic relationship matrices to estimate levels of inbreeding.
Article in Genetics, selection, evolution : GSE, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.
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Who cites it
43 citing papers in PubMed.
- Genomic diversity, inbreeding, and selection signatures in duroc, landrace, and yorkshire pigs from a long-term closed breeding system.Journal of applied genetics · 2026Article
- Analysis of Inbreeding, Population Structure, and Genetic Diversity in the Kumamoto Sub-Breed of Japanese Brown Cattle.Animals : an open access journal from MDPI · 2026Article
- Probabilities of two alleles being identity by state at unobserved loci predicted by observed loci in cattle populations.Scientific reports · 2026Article
- Genetic diversity and population structure of U.S. Suffolk sheep participating in the national sheep improvement program.Genetics, selection, evolution : GSE · 2026Article
- Article
- Comparing Genomic and Pedigree Inbreeding Coefficients in the Slovenian Lipizzan Horse as a Case Study for Small Closed Populations.Animals : an open access journal from MDPI · 2025Article
- Maintenance of genetic diversity in subdivided populations using genomic coancestry matrices.Molecular ecology resources · 2025Article
- Genomic Diversity of U.S. Katahdin Hair Sheep.Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie · 2025Article
- Genome-wide analysis provides insight into the genetic diversity and adaptability of Kazakhstan local goats.Scientific reports · 2025Article
- Low-input breeding potential in stone pine, a multipurpose forest tree with low genome diversity.G3 (Bethesda, Md.) · 2025Article
- Towards Genetically Informed Conservation of the Bardoka and Karakachan Sheep Breeds Autochthonous to Serbia.Animals : an open access journal from MDPI · 2025Article
- Genetic architecture and genomic prediction for yield, winter damage, and digestibility traits in timothy (Phleum pratense L.) using genotyping-by-sequencing data.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Estimation of Inbreeding Depression From Overdominant Loci Using Molecular Markers.Evolutionary applications · 2025Article
- Performance of homozygosity by descent in two mice lines divergently selected for birth weight environmental variability.Scientific reports · 2025Article
- Inbreeding depression for litter size in two mice lines under divergent selection for environmental birth weight variability using genomic data.Journal of animal science · 2025Article
- Genomic and health characteristics of crossbred dairy cattle in central Uganda.Frontiers in genetics · 2025Article
- Exploring inbreeding depression in Brazilian Angus cattle population using pedigree and genomic data.Frontiers in genetics · 2025Article
- Genomic diversity and population structure analysis of four geographically distinct Holstein cattle populations using genome-wide DNA profiling.Archives animal breeding · 2025Article
- Evaluation of genomic mating approach based on genetic algorithms for long-term selection in Huaxi cattle.BMC genomics · 2024Article
- Genome-Wide Development and Characterization of Microsatellite Markers in the Great Web-Spinning SawflyEcology and evolution · 2024Article
Corrections and comments
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Authors and funding
8 authors.
Funding
Abstract
backgroundGenomic relationship matrices are used to obtain genomic inbreeding coefficients. However, there are several methodologies to compute these matrices and there is still an unresolved debate on which one provides the best estimate of inbreeding. In this study, we investigated measures of inbreeding obtained from five genomic matrices, including the Nejati-Javaremi allelic relationship matrix (F
resultsExcept for F
conclusionsGenomic inbreeding coefficients obtained from the diagonal elements of genomic matrices can lead to inconsistent results in terms of gain and loss of genetic variability and inbreeding depression estimates, and thus to misleading interpretations. Although these matrices have proven to be very efficient in increasing the accuracy of genomic predictions, they do not always provide a useful measure of inbreeding.
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