Evidence map›Paper›PMID 33932127›Full record

ArticleCancer medicine2021

TNF-α/NF-κB signaling epigenetically represses PSD4 transcription to promote alcohol-related hepatocellular carcinoma progression.

Jia'ning Shi, Shupeng Song, Shuangxing Li, Kaili Zhang, Yinghua Lan, Yongguo Li

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. PlasmaHepatology forum · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jia'ning ShiDepartment of Infectious Disease, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Shupeng SongDepartment of Infectious Disease, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Shuangxing LiDepartment of Infectious Disease, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Kaili ZhangDepartment of Infectious Disease, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Yinghua LanDepartment of Infectious Disease, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Yongguo LiDepartment of Infectious Disease, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.ORCID 0000-0002-9056-0057
Harbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChronic alcohol consumption is more frequently associated with advanced, aggressive hepatocellular carcinoma (HCC) tumors. Alcohol adversely impacts ER/Golgi membrane trafficking and Golgi protein N-glycosylation in hepatocytes; these effects have been attributed (in part) to dysregulated adenosine diphosphate-ribosylation factor (ARF) GTPase signaling. Here, we investigated the role of the ARF GTPase guanine exchange factor PSD4 in HCC progression.

methodsR-based bioinformatics analysis was performed on publicly available array data. Modulating gene expression was accomplished via lentiviral vectors. Gene expression was analyzed using quantitative real-time PCR and immunoblotting. PSD4 promoter methylation was assessed using quantitative methylation-specific PCR. Phospho-p65(S276)/DNMT1 binding to the PSD4 promoter was analyzed via chromatin immunoprecipitation. We constructed ethanol/DEN-induced and DEN only-induced transgenic murine models of HCC.

resultsWe identified PSD4 as a hypermethylated, suppressed gene in alcohol-related HCC tumors; however, PSD4 was not dysregulated in all-cause HCC tumors. Certain HCC cell lines also displayed varying degrees of PSD4 downregulation. PSD4 overexpression or knockdown decreased and increased cell migration and invasiveness, respectively. Mechanistically, PSD4 transcription was repressed by TNF-α-induced phospho-p65(S276)'s recruitment of DNA methyltransferase 1 (DNMT1), resulting in PSD4 promoter methylation. PSD4 inhibited pro-EMT CDC42 activity, resulting in downregulation of E-cadherin and upregulation of N-cadherin and vimentin. Hepatocyte-specific PSD4 overexpression reduced ethanol/DEN-induced HCC tumor progression and EMT marker expression in vivo.

conclusionsPSD4 is a hypermethylated, suppressed gene in alcohol-related HCC tumors that negatively modulated pro-EMT CDC42 activity. Furthermore, we present a novel phospho-NF-κB p65(S276)/DNMT1-mediated promoter methylation mechanism by which TNF-α/NF-κB signaling represses PSD4 transcription in HCC cells.

Indexed as

Alcohol DrinkingAlcoholsAnimalsCadherinsCarcinoma, HepatocellularCell Line, TumorDNA (Cytosine-5-)-Methyltransferase 1DNA MethylationDown-RegulationEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticGuanine Nucleotide Exchange FactorsHepatocytesHep G2 CellsHumansAlcoholsCadherinsDNA (Cytosine-5-)-Methyltransferase 1Guanine Nucleotide Exchange FactorsNF-kappa BPSD4 protein, humanTranscription Factor RelATumor Necrosis Factor-alphaalcoholEFA6BHCCp65PSD4

Identifiers

PMID33932127
PMCPMC8124102
OpenAlexW3158462709

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.