Evidence map›Paper›PMID 33931626›Full record

ArticleHorticulture research2021

Co-located quantitative trait loci mediate resistance to Agrobacterium tumefaciens, Phytophthora cinnamomi, and P. pini in Juglans microcarpa × J. regia hybrids.

Ramesh K Ramasamy, Ming-Cheng Luo, Charles A Leslie, Dianne Velasco, Natalia Ott, Ali McClean, Abhaya M Dandekar, Mallikarjuna Aradhya, Patrick J Brown, Gregory T Browne and 3 more

Open access · goldAbstract read
In one paragraph

Article in Horticulture research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Co-Location of QTL for Vigor and Resistance to Three Diseases inInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Ramesh K RamasamyDepartment of Plant Sciences, University of California, Davis, USA.
Ming-Cheng LuoDepartment of Plant Sciences, University of California, Davis, USA.ORCID http://orcid.org/0000-0002-9744-5887
Charles A LeslieDepartment of Plant Sciences, University of California, Davis, USA.
Dianne VelascoDepartment of Plant Sciences, University of California, Davis, USA.
Natalia OttUSDA-ARS Crops Pathology and Genetics Research Unit, Department of Plant Pathology, University of California, Davis, USA.
Ali McCleanUSDA-ARS Crops Pathology and Genetics Research Unit, Department of Plant Pathology, University of California, Davis, USA.
Abhaya M DandekarDepartment of Plant Sciences, University of California, Davis, USA.ORCID http://orcid.org/0000-0001-7925-4086
Mallikarjuna AradhyaNational Clonal Germplasm Repository, USDA-ARS, University of California, Davis, USA.
Patrick J BrownDepartment of Plant Sciences, University of California, Davis, USA.
Gregory T BrowneUSDA-ARS Crops Pathology and Genetics Research Unit, Department of Plant Pathology, University of California, Davis, USA.
Daniel A KluepfelUSDA-ARS Crops Pathology and Genetics Research Unit, Department of Plant Pathology, University of California, Davis, USA.
Andreas WestphalDepartment of Nematology, University of California, Riverside, USA.
Jan DvorakDepartment of Plant Sciences, University of California, Davis, USA. jdvorak@ucdavis.edu.ORCID http://orcid.org/0000-0002-0427-6528
Plant (United States) · USUniversity of California, Davis · USCarnegie Department of Plant Biology · USNational Clonal Germplasm Repository · USUniversity of California, Riverside · US

Funding

United States Department of Agriculture | Agricultural Research Service (USDA Agricultural Research Service) 2018-51181-28437United States Department of Agriculture | Agricultural Research Service (USDA Agricultural Research Service) 2032-22000-016-00DUnited States Department of Agriculture | Agricultural Research Service (USDA Agricultural Research Service) 59-5306-2-333
6 · The paper itself

Abstract

Soil-borne plant pathogens represent a serious threat that undermines commercial walnut (Juglans regia) production worldwide. Crown gall, caused by Agrobacterium tumefaciens, and Phytophthora root and crown rots, caused by various Phytophthora spp., are among the most devastating walnut soil-borne diseases. A recognized strategy to combat soil-borne diseases is adoption of resistant rootstocks. Here, resistance to A. tumefaciens, P. cinnamomi, and P. pini is mapped in the genome of Juglans microcarpa, a North American wild relative of cultivated walnut. Half-sib J. microcarpa mother trees DJUG 31.01 and DJUG 31.09 were crossed with J. regia cv. Serr, producing 353 and 400 hybrids, respectively. Clonally propagated hybrids were genotyped by sequencing to construct genetic maps for the two populations and challenged with the three pathogens. Resistance to each of the three pathogens was mapped as a major QTL on the long arm of J. microcarpa chromosome 4D and was associated with the same haplotype, designated as haplotype b, raising the possibility that the two mother trees were heterozygous for a single Mendelian gene conferring resistance to all three pathogens. The deployment of this haplotype in rootstock breeding will facilitate breeding of a walnut rootstock resistant to both crown gall and Phytophthora root and crown rots.

Identifiers

PMID33931626
PMCPMC8087670
OpenAlexW3157268235

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.