Evidence map›Paper›PMID 33931120›Full record

Observational studyAntimicrobial resistance and infection control2021

Colonization with multidrug-resistant Enterobacteriaceae among infants: an observational study in southern Sri Lanka.

Hannah R Meredith, Sarath Kularatna, Kristin Nagaro, Ajith Nagahawatte, Champica Bodinayake, Ruvini Kurukulasooriya, Nishadhi Wijesingha, Lyndy B Harden, Bhagya Piyasiri, Amr Hammouda and 7 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Antimicrobial resistance and infection control, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 3 pooled it
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 3 syntheses or guidelines pooled it, 15 citations in OpenAlex.

  1. Pooled it
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  10. Clonal Spread of Hospital-Acquired NDM-1-ProducingAntibiotics (Basel, Switzerland) · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 3 countries.

Hannah R MeredithDepartment of Biomedical Engineering, Duke University, Durham, NC, USA. hmeredi4@jhu.edu.ORCID 0000-0002-5315-7568
Sarath KularatnaDepartment of Obstetrics and Gynecology, Faculty of Medicine, University of Ruhuna, Galle, Sri Lanka.
Kristin NagaroDivision of Infectious Diseases, Department of Medicine, Duke University School of Medicine, Durham, NC, USA.
Ajith NagahawatteDepartment of Microbiology, Faculty of Medicine, University of Ruhuna, Galle, Sri Lanka.
Champica BodinayakeDuke Global Health Institute, Duke University, Durham, NC, USA.
Ruvini KurukulasooriyaDepartment of Microbiology, Faculty of Medicine, University of Ruhuna, Galle, Sri Lanka.
Nishadhi WijesinghaDepartment of Microbiology, Faculty of Medicine, University of Ruhuna, Galle, Sri Lanka.
Lyndy B HardenDepartment of Population Health and Pathobiology, NC State University, Raleigh, NC, USA.
Bhagya PiyasiriTeaching Hospital Karapitiya, Galle, Sri Lanka.
Amr HammoudaDurham Veterans Affairs Health System, Durham, NC, USA.
Brian M WiegmannDepartment of Entomology and Plant Pathology, NC State University, Raleigh, NC, USA.
Bradly P NicholsonInstitute of Medical Research, Durham, NC, USA.
Maria JoyceDivision of Infectious Diseases, Department of Medicine, Duke University School of Medicine, Durham, NC, USA.
Christopher W WoodsDivision of Infectious Diseases, Department of Medicine, Duke University School of Medicine, Durham, NC, USA.
Arnoud H M Van VlietDepartment of Pathology and Infectious Diseases, School of Veterinary Medicine, University of Surrey, Guildford, UK.
Siddhartha ThakurDepartment of Population Health and Pathobiology, NC State University, Raleigh, NC, USA.
L Gayani TillekeratneDivision of Infectious Diseases, Department of Medicine, Duke University School of Medicine, Durham, NC, USA. gayani.tillekeratne@duke.edu.
University of Ruhuna · LKDuke University · USNorth Carolina State University · USDurham VA Health Care System · USJohns Hopkins University · USTeaching Hospital Kandy · LKUniversity of Surrey · GB

Funding

Novel Diagnostics to Improve Antimicrobial Stewardship for Acute Respiratory Tract Infections in Resource-Limited SettingsK23AI125677 · NIAID · DUKE UNIVERSITY · PI TILLEKERATNE, GAYANI · 2017 to 2021
$905k
FDA GenomeTrakr program 1U18FD00678801NIAID NIH HHS K23 AI125677
6 · The paper itself

Abstract

backgroundThe timing of and risk factors for intestinal colonization with multidrug-resistant Enterobacteriaceae (MDRE) are still poorly understood in areas with high MDRE carriage. We determined the prevalence, timing, and risk factors associated with MDRE intestinal colonization among infants in southern Sri Lanka.

methodsWomen and their newborn children were enrolled within 48 h after delivery in southern Sri Lanka. Rectal swabs were collected from women and infants at enrollment and 4-6 weeks later. Enterobacteriaceae were isolated and identified as MDRE (positive for extended-spectrum β-lactamases or carbapenem resistant) using standard microbiologic procedures. We used exact methods (Fisher's exact and Kruskal-Wallis tests) and multivariable logistic regression to identify sociodemographic and clinical features associated with MDRE intestinal colonization. Whole-genome sequencing was performed on selected MDRE isolates to identify phylogroups and antibiotic resistance-encoding genes were identified with NCBI's AMRfinder tool.

resultsOverall, 199 post-partum women and 199 infants were enrolled; 148/199 (74.4%) women and 151/199 (75.9%) infants were reassessed later in the community. Twenty-four/199 (12.1%) women and 3/199 (1.5%) infants displayed intestinal colonization with MDRE at enrollment, while 26/148 (17.6%) women and 24/151 (15.9%) infants displayed intestinal colonization with MDRE at the reassessment. While there were no risk factors associated with infant colonization at enrollment, multivariable analysis indicated that risk factors for infant colonization at reassessment included mother colonized at enrollment (aOR = 3.62) or reassessment (aOR = 4.44), delivery by Cesarean section (aOR = 2.91), and low birth weight (aOR = 5.39). Of the 20 MDRE isolates from infants that were sequenced, multilocus sequence typing revealed that 6/20 (30%) were clustered on the same branch as MDRE isolates found in the respective mothers. All sequenced isolates for mothers (47) and infants (20) had at least one ESBL-producing gene. Genes encoding fosfomycin resistance were found in 33/47 (70%) of mothers' isolates and 16/20 (80%) of infants' isolates and genes encoding resistance to colistin were found in one (2%) mother's isolate.

conclusionsOur results suggest that a substantial proportion of infants undergo MDRE intestinal colonization within 6 weeks of birth, potentially due to postnatal rather than intranatal transmission.

Indexed as

Drug Resistance, Multiple, BacterialAdultEnterobacteriaceaeEnterobacteriaceae InfectionsFemaleHospitals, TeachingHumansInfant, NewbornMalePregnancyRectumSri LankaWhole Genome SequencingCREESBLIntestinal colonizationMultidrug-resistant EnterobacteriaceaeSri Lanka

Identifiers

PMID33931120
PMCPMC8086278
OpenAlexW3158684756

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.