Evidence map›Paper›PMID 33928437›Full record

ArticleJournal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry2021

Identification of a copper ion recognition peptide sequence in the subunit II of cytochrome c oxidase: a combined theoretical and experimental study.

Dwaipayan Dutta Gupta, Imon Mandal, Chandrani Nayak, Shambhu Nath Jha, Dibyendu Bhattacharyya, Ravindra Venkatramani, Shyamalava Mazumdar

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In one paragraph

Article in Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Dwaipayan Dutta Gupta *Tata Institute of Fundamental Research, Homi Bhabha Road, Colaba, Mumbai, 400 005, India.
Imon Mandal *Tata Institute of Fundamental Research, Homi Bhabha Road, Colaba, Mumbai, 400 005, India.
Chandrani NayakAtomic and Molecular Physics Division, Bhabha Atomic Research Centre, Mumbai, 400 085, India.
Shambhu Nath JhaAtomic and Molecular Physics Division, Bhabha Atomic Research Centre, Mumbai, 400 085, India.
Dibyendu BhattacharyyaAtomic and Molecular Physics Division, Bhabha Atomic Research Centre, Mumbai, 400 085, India.
Ravindra VenkatramaniTata Institute of Fundamental Research, Homi Bhabha Road, Colaba, Mumbai, 400 005, India. ravi.venkatramani@tifr.res.in.
Shyamalava MazumdarTata Institute of Fundamental Research, Homi Bhabha Road, Colaba, Mumbai, 400 005, India. shyamal@tifr.res.in.
Tata Institute of Fundamental Research · INBhabha Atomic Research Centre · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of the pentapeptide, NHSFM, derived from the surface exposed part of the metal ion binding loop of the subunit II of cytochrome c oxidase on the maturation of the binuclear purple CuA center of the enzyme has been investigated using several experimental and computational methods. The copper ion was found to form 1:1 complex of the pentapeptide with a binding constant ~ 10

Indexed as

Catalytic DomainCopperElectron Transport Complex IVHydrogen-Ion ConcentrationModels, MolecularMolecular Dynamics SimulationProtein ConformationProtein SubunitsCopperElectron Transport Complex IVProtein SubunitsCopper binding peptideCytochrome c oxidaseEXAFSRestrained molecular dynamics (RMD) simulationsTDDFT

Identifiers

PMID33928437
OpenAlexW3159411525

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.