Evidence map›Paper›PMID 33927701›Full record

ReviewFrontiers in microbiology2021

An Overview of Biological and Computational Methods for Designing Mechanism-Informed Anti-biofilm Agents.

Andy Y An, Ka-Yee Grace Choi, Arjun S Baghela, Robert E W Hancock

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 52 citations in OpenAlex.

  1. Modeling chronic infection withInfection and immunity · 2026
    Article
  2. Article
  3. Frontiers in bioinformatics · 2026
    Review
  4. Article
  5. Review
  6. Review
  7. Review
  8. Antibiofilm approaches as a new paradigm for treating infections.Progress in biomedical engineering (Bristol, England) · 2024
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. One Health-One Biofilm.Veterinary research · 2022
    Article
  14. Biofilm and Small Colony Variants-An Update onInternational journal of molecular sciences · 2022
    Review
  15. Article
  16. Factors mediatingCurrent research in microbial sciences · 2022
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Andy Y AnCentre for Microbial Diseases and Immunity Research, University of British Columbia, Vancouver, BC, Canada.
Ka-Yee Grace ChoiCentre for Microbial Diseases and Immunity Research, University of British Columbia, Vancouver, BC, Canada.
Arjun S BaghelaCentre for Microbial Diseases and Immunity Research, University of British Columbia, Vancouver, BC, Canada.
Robert E W HancockCentre for Microbial Diseases and Immunity Research, University of British Columbia, Vancouver, BC, Canada.
University of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial biofilms are complex and highly antibiotic-resistant aggregates of microbes that form on surfaces in the environment and body including medical devices. They are key contributors to the growing antibiotic resistance crisis and account for two-thirds of all infections. Thus, there is a critical need to develop anti-biofilm specific therapeutics. Here we discuss mechanisms of biofilm formation, current anti-biofilm agents, and strategies for developing, discovering, and testing new anti-biofilm agents. Biofilm formation involves many factors and is broadly regulated by the stringent response, quorum sensing, and c-di-GMP signaling, processes that have been targeted by anti-biofilm agents. Developing new anti-biofilm agents requires a comprehensive systems-level understanding of these mechanisms, as well as the discovery of new mechanisms. This can be accomplished through omics approaches such as transcriptomics, metabolomics, and proteomics, which can also be integrated to better understand biofilm biology. Guided by mechanistic understanding,

Indexed as

anti-biofilm agentsantibiotic resistancebiofilm modelsbiofilmsmachine learningorganoidssystems biologyvirtual screening

Identifiers

PMID33927701
PMCPMC8076610
OpenAlexW3154636575

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.