Evidence map›Paper›PMID 33927290›Full record

ArticleScientific reports2021

Tracing the origin of the crayfish plague pathogen, Aphanomyces astaci, to the Southeastern United States.

Laura Martín-Torrijos, María Martínez-Ríos, Gloria Casabella-Herrero, Susan B Adams, Colin R Jackson, Javier Diéguez-Uribeondo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 50 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Laura Martín-TorrijosDepartment of Mycology, Real Jardín Botánico-CSIC, Plaza Murillo 2, 28014, Madrid, Spain. lmtorrijos@rjb.csic.es.
María Martínez-RíosDepartment of Mycology, Real Jardín Botánico-CSIC, Plaza Murillo 2, 28014, Madrid, Spain.
Gloria Casabella-HerreroDepartment of Mycology, Real Jardín Botánico-CSIC, Plaza Murillo 2, 28014, Madrid, Spain.
Susan B Adams *USDA Forest Service, Southern Research Station, Center for Bottomland Hardwoods Research, 1000 Front Street, Oxford, MS, 38655, USA.
Colin R Jackson *Department of Biology, University of Mississippi, University, MS, 38677, USA.
Javier Diéguez-Uribeondo *Department of Mycology, Real Jardín Botánico-CSIC, Plaza Murillo 2, 28014, Madrid, Spain.
Real Jardín Botánico · ESSouthern Research Station · USUniversity of Mississippi · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The oomycete Aphanomyces astaci is an emerging infectious pathogen affecting freshwater crayfish worldwide and is responsible for one of the most severe wildlife pandemics ever reported. The pathogen has caused mass mortalities of freshwater crayfish species in Europe and Asia, and threatens other susceptible species in Madagascar, Oceania and South America. The pathogen naturally coexists with some North American crayfish species that are its chronic carriers. Presumptions that A. astaci originated in North America are based on disease outbreaks that followed translocations of North American crayfish and on the identification of the pathogen mainly in Europe. We studied A. astaci in the southeastern US, a center of freshwater crayfish diversity. In order to decipher the origin of the pathogen, we investigated (1) the distribution and haplotype diversity of A. astaci, and (2) whether there are crayfish species-specificities and/or geographical restrictions for A. astaci haplotypes. A total of 132 individuals, corresponding to 19 crayfish species and one shrimp species from 23 locations, tested positive for A. astaci. Mitochondrial rnnS and rnnL sequences indicated that A. astaci from the southeastern US exhibited the highest genetic diversity so far described for the pathogen (eight haplotypes, six of which we newly describe). Our findings that A. astaci is widely distributed and genetically diverse in the region supports the hypothesis that the pathogen originated in the southeastern US. In contrast to previous assumptions, however, the pathogen exhibited no clear species-specificity or geographical patterns.

Indexed as

AnimalsAphanomycesAstacoideaHaplotypesHost SpecificityPhylogeographySoutheastern United States

Identifiers

PMID33927290
PMCPMC8085144
OpenAlexW3157610030

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.