Evidence map›Paper›PMID 33927252›Full record

ArticleScientific reports2021

OptoGap is an optogenetics-enabled assay for quantification of cell-cell coupling in multicellular cardiac tissue.

Patrick M Boyle, Jinzhu Yu, Aleksandra Klimas, John C Williams, Natalia A Trayanova, Emilia Entcheva

Open access · goldAbstract readValidation Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Cardiac optogenetics: a decade of enlightenment.Nature reviews. Cardiology · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Cardiac Optogenetics: 2018.JACC. Clinical electrophysiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Patrick M Boyle *Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Jinzhu Yu *Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY, USA.
Aleksandra KlimasDepartment of Biomedical Engineering, Stony Brook University, Stony Brook, NY, USA.
John C WilliamsDepartment of Biomedical Engineering, Stony Brook University, Stony Brook, NY, USA.
Natalia A TrayanovaDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Emilia EntchevaDepartment of Biomedical Engineering, Stony Brook University, Stony Brook, NY, USA. entcheva@gwu.edu.
Stony Brook University · USGeorge Washington University · USJohns Hopkins University · USSeattle University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008444 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 1992 to 2024
$12.6M
BIOMEDICAL ENGINEERING TRAINING PROGRAMT32GM007057 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KANOLD, PATRICK O, KARCHIN, RACHEL · 1985 to 2023
$10.4M
Infarct-related Ventricular Tachycardia Mechanisms: From Micro to ClinicalR01HL142496 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI TRAYANOVA, NATALIA A. · 2019 to 2022
$3.1M
Scalable platform for optimizing human cardiac tissue engineering via optical pacing and on-demand oxygenationR01HL144157 · NHLBI · GEORGE WASHINGTON UNIVERSITY · PI ENTCHEVA, EMILIA, KAY, MATTHEW W. · 2019 to 2022
$2.8M
Exploration of Arrhythmogenic Triggers and Substrates in Heart FailureR01HL126802 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI EFIMOV, IGOR R, GORELIK, JULIA · 2016 to 2019
$2.8M
Cardiac Optogenetics: A Cell Delivery ApproachR01HL111649 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI ENTCHEVA, EMILIA · 2012 to 2016
$2.4M
Mechanisms of impaired subcortical auditory processing in schizophreniaF30MH122136 · NIMH · STATE UNIVERSITY NEW YORK STONY BROOK · PI WILLIAMS, JOHN CONNOR · 2019 to 2022
$180k
National Science Foundation, United States 1623068National Science Foundation, United States 1705645National Science Foundation, United States 1827535NHLBI NIH HHS R01 HL111649NHLBI NIH HHS R01 HL142496NHLBI NIH HHS R01 HL144157NIGMS NIH HHS T32 GM007057NIGMS NIH HHS T32 GM008444NIH HHS R01HL111649NIH HHS R01HL126802NIH HHS R01HL144157-01A1NIMH NIH HHS F30 MH122136
6 · The paper itself

Abstract

Intercellular electrical coupling is an essential means of communication between cells. It is important to obtain quantitative knowledge of such coupling between cardiomyocytes and non-excitable cells when, for example, pathological electrical coupling between myofibroblasts and cardiomyocytes yields increased arrhythmia risk or during the integration of donor (e.g., cardiac progenitor) cells with native cardiomyocytes in cell-therapy approaches. Currently, there is no direct method for assessing heterocellular coupling within multicellular tissue. Here we demonstrate experimentally and computationally a new contactless assay for electrical coupling, OptoGap, based on selective illumination of inexcitable cells that express optogenetic actuators and optical sensing of the response of coupled excitable cells (e.g., cardiomyocytes) that are light-insensitive. Cell-cell coupling is quantified by the energy required to elicit an action potential via junctional current from the light-stimulated cell(s). The proposed technique is experimentally validated against the standard indirect approach, GapFRAP, using light-sensitive cardiac fibroblasts and non-transformed cardiomyocytes in a two-dimensional setting. Its potential applicability to the complex three-dimensional setting of the native heart is corroborated by computational modelling and proper calibration. Lastly, the sensitivity of OptoGap to intrinsic cell-scale excitability is robustly characterized via computational analysis.

Indexed as

Cell CommunicationAction PotentialsChannelrhodopsinsComputer SimulationHeartMyocytes, CardiacOptogeneticsChannelrhodopsins

Identifiers

PMID33927252
PMCPMC8085001
OpenAlexW3158519046

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.