Evidence map›Paper›PMID 33925452›Full record

ArticleViruses2021

ITN-VIROINF: Understanding (Harmful) Virus-Host Interactions by Linking Virology and Bioinformatics.

Winfried Goettsch, Niko Beerenwinkel, Li Deng, Lars Dölken, Bas E Dutilh, Florian Erhard, Lars Kaderali, Max von Kleist, Roland Marquet, Jelle Matthijnssens and 8 more

Abstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Databases, Knowledgebases, and Software Tools for Virus Informatics.Advances in experimental medicine and biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Winfried GoettschRNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University, 07743 Jena, Germany.ORCID 0000-0003-1015-0726
Niko BeerenwinkelDepartment of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 4058 Basel, Switzerland.ORCID 0000-0002-0573-6119
Li DengInstitute of Virology, Helmholtz Centre Munich and Technical University Munich, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.ORCID 0000-0003-0225-0663
Lars DölkenInstitut für Virologie und Immunbiologie, Julius-Maximilians-Universität Würzburg, 97078 Würzburg, Germany.ORCID 0000-0002-4651-3544
Bas E DutilhTheoretical Biology and Bioinformatics, Science for Life, Utrecht University, Hugo R. Kruytgebouw, Padualaan 8, 3584 CH Utrecht, The Netherlands.ORCID 0000-0003-2329-7890
Florian ErhardInstitut für Virologie und Immunbiologie, Julius-Maximilians-Universität Würzburg, 97078 Würzburg, Germany.ORCID 0000-0002-3574-6983
Lars KaderaliInstitute of Bioinformatics, University Medicine Greifswald, 17475 Greifswald, Germany.ORCID 0000-0002-2359-2294
Max von KleistMF1 Bioinformatics, Robert Koch-Institute, 13353 Berlin, Germany.
Roland MarquetCNRS, Architecture et Réactivité de l'ARN, Université de Strasbourg, UPR 9002 Strasbourg, France.ORCID 0000-0002-4209-3976
Jelle MatthijnssensDepartment of Microbiology and Immunology, Katholieke Universiteit Leuven, Herestraat 49 Box 1040, 3000 Leuven, Belgium.ORCID 0000-0003-1188-9733
Shawna McCallinDepartment of Neuro-Urology, Balgrist University Hospital, University of Zürich, Forchstrasse 340, 8008 Zürich, Switzerland.ORCID 0000-0002-4277-7753
Dino McMahonInstitute of Biology, Freie Universität Berlin, Schwendenerstr. 1, 14195 Berlin, Germany.ORCID 0000-0003-1119-5299
Thomas RatteiDivision of Computational Systems Biology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Althanstraße 14, 1090 Vienna, Austria.ORCID 0000-0002-0592-7791
Ronald P Van RijDepartment of Medical Microbiology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, P.O. Box 9101, 6500 HB Nijmegen, The Netherlands.ORCID 0000-0003-0221-4689
David L RobertsonMRC, University of Glasgow Centre for Virus Research (CVR), 464 Bearsden Road, Glasgow G61 1QH, UK.ORCID 0000-0001-6338-0221
Martin SchwemmleInstitute of Virology, Medical Center-University of Freiburg, Hermann-Herder-Strasse 11, 79104 Freiburg, Germany.ORCID 0000-0002-2972-6855
Noam Stern-GinossarDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.ORCID 0000-0003-3583-5932
Manja MarzRNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University, 07743 Jena, Germany.ORCID 0000-0003-4783-8823

Funding

Medical Research Council MC_UU_12014/12
6 · The paper itself

Abstract

Many recent studies highlight the fundamental importance of viruses. Besides their important role as human and animal pathogens, their beneficial, commensal or harmful functions are poorly understood. By developing and applying tailored bioinformatical tools in important virological models, the Marie Skłodowska-Curie Initiative International Training Network VIROINF will provide a better understanding of viruses and the interaction with their hosts. This will open the door to validate methods of improving viral growth, morphogenesis and development, as well as to control strategies against unwanted microorganisms. The key feature of VIROINF is its interdisciplinary nature, which brings together virologists and bioinformaticians to achieve common goals.

Indexed as

Host Microbial InteractionsSoftwareVirus Physiological PhenomenaAnimalsComputational BiologyHumansMachine LearningUser-Computer InterfaceVirologybioinformaticvirologyvirusvirus host interaction

Identifiers

PMID33925452
PMCPMC8145447

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.