Evidence map›Paper›PMID 33921228›Full record

ArticleInternational journal of molecular sciences2021

SARS-CoV-2 Papain-Like Protease Potential Inhibitors-In Silico Quantitative Assessment.

Adam Stasiulewicz, Alicja W Maksymiuk, Mai Lan Nguyen, Barbara Bełza, Joanna I Sulkowska

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. Progress of the "Molecular Informatics" Section in 2022.International journal of molecular sciences · 2023
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. RSC advances · 2021
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Adam StasiulewiczCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.ORCID 0000-0003-3346-5579
Alicja W MaksymiukCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.ORCID 0000-0001-6377-321X
Mai Lan NguyenCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.ORCID 0000-0001-8117-0391
Barbara BełzaCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.ORCID 0000-0002-0066-446X
Joanna I SulkowskaCentre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland.ORCID 0000-0003-2452-0724

Funding

Narodowym Centrum Nauki #2020/01/0/NZ7/00244
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) encodes the papain-like protease (PLpro). The protein not only plays an essential role in viral replication but also cleaves ubiquitin and ubiquitin-like interferon-stimulated gene 15 protein (ISG15) from host proteins, making it an important target for developing new antiviral drugs. In this study, we searched for novel, noncovalent potential PLpro inhibitors by employing a multistep in silico screening of a 15 million compound library. The selectivity of the best-scored compounds was evaluated by checking their binding affinity to the human ubiquitin carboxy-terminal hydrolase L1 (UCH-L1), which, as a deubiquitylating enzyme, exhibits structural and functional similarities to the PLpro. As a result, we identified 387 potential, selective PLpro inhibitors, from which we retrieved the 20 best compounds according to their IC

Indexed as

AnimalsAntiviral AgentsComputer SimulationCoronavirus Papain-Like ProteasesCrystallography, X-RayDatabases, ChemicalDatabases, ProteinDrug Evaluation, PreclinicalHumansInhibitory Concentration 50Lethal Dose 50LigandsMutagenicity TestsProtease InhibitorsQuantitative Structure-Activity RelationshipRatsAntiviral AgentsCoronavirus Papain-Like ProteasesLigandspapain-like protease, SARS-CoV-2Protease InhibitorsUbiquitin ThiolesteraseUCHL1 protein, humancoronavirusCOVID-19dockingpapain-like proteasepharmacophorePLproSARS-CoV-2UCH-L1virtual screening

Identifiers

PMID33921228
PMCPMC8069282

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.