Evidence map›Paper›PMID 33918885›Full record

ReviewInternational journal of molecular sciences2021

Detection of Genomic Uracil Patterns.

Angéla Békési, Eszter Holub, Hajnalka Laura Pálinkás, Beáta G Vértessy

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. CRISPR/Cas9 therapeutics: progress and prospects.Signal transduction and targeted therapy · 2023
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Angéla BékésiDepartment of Applied Biotechnology & Food Sciences, Budapest University of Technology and Economics, H-1111 Budapest, Hungary.
Eszter HolubDepartment of Applied Biotechnology & Food Sciences, Budapest University of Technology and Economics, H-1111 Budapest, Hungary.
Hajnalka Laura PálinkásDepartment of Applied Biotechnology & Food Sciences, Budapest University of Technology and Economics, H-1111 Budapest, Hungary.
Beáta G VértessyDepartment of Applied Biotechnology & Food Sciences, Budapest University of Technology and Economics, H-1111 Budapest, Hungary.
Budapest University of Technology and Economics · HU

Funding

National Research, Development and Innovation Office of Hungary K119493
6 · The paper itself

Abstract

The appearance of uracil in the deoxyuridine moiety of DNA is among the most frequently occurring genomic modifications. Three different routes can result in genomic uracil, two of which do not require specific enzymes: spontaneous cytosine deamination due to the inherent chemical reactivity of living cells, and thymine-replacing incorporation upon nucleotide pool imbalances. There is also an enzymatic pathway of cytosine deamination with multiple DNA (cytosine) deaminases involved in this process. In order to describe potential roles of genomic uracil, it is of key importance to utilize efficient uracil-DNA detection methods. In this review, we provide a comprehensive and critical assessment of currently available uracil detection methods with special focus on genome-wide mapping solutions. Recent developments in PCR-based and in situ detection as well as the quantitation of genomic uracil are also discussed.

Indexed as

DNAGenomeUracilAnimalsDNA RepairDNA ReplicationGenetic TestingGenome-Wide Association StudyHigh-Throughput Nucleotide SequencingHumansIn Situ HybridizationNucleotidesPolymerase Chain ReactionSignal TransductionUracil-DNA GlycosidaseDNANucleotidesUracilUracil-DNA Glycosidasedot blotgenome-wide uracil mappingin situ detectionPCR-based U-DNA detectionuracil-DNA

Identifiers

PMID33918885
PMCPMC8070346
OpenAlexW3155284501

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.