Evidence map›Paper›PMID 33918652›Full record

ArticleCells2021

Direct Conjugation of NEDD8 to the N-Terminus of a Model Protein Can Induce Degradation.

Kartikeya Vijayasimha, Marilyn Vo Tran, Amy L Leestemaker-Palmer, Brian P Dolan

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Fast friends - Ubiquitin-like modifiers as engineered fusion partners.Seminars in cell & developmental biology · 2022
    Review
  5. Article
  6. Article
  7. UBE2G1 Is a Critical Component of Immune Response to the Infection ofInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kartikeya VijayasimhaCarlson College of Veterinary Medicine, Oregon State University, Corvallis, OR 97331, USA.
Marilyn Vo TranCarlson College of Veterinary Medicine, Oregon State University, Corvallis, OR 97331, USA.
Amy L Leestemaker-PalmerCarlson College of Veterinary Medicine, Oregon State University, Corvallis, OR 97331, USA.
Brian P DolanCarlson College of Veterinary Medicine, Oregon State University, Corvallis, OR 97331, USA.
Oregon State University · US

Funding

The Role of Ubiquitin and Ubiquitin-Like Molecules in Direct Antigen PresentationR01AI130059 · NIAID · OREGON STATE UNIVERSITY · PI DOLAN, BRIAN PAUL · 2017 to 2021
$1.8M
NIAID NIH HHS R01 AI130059
6 · The paper itself

Abstract

While the role of ubiquitin in protein degradation is well established, the role of other ubiquitin-like proteins (UBLs) in protein degradation is less clear. Neural precursor cell expressed developmentally down-regulated protein 8 (NEDD8) is the UBL with the highest level of amino acids identified when compared to ubiquitin. Here we tested if the N-terminal addition of NEDD8 to a protein of interest could lead to degradation. Mutation of critical glycine residues required for normal NEDD8 processing resulted in a non-cleavable fusion protein that was rapidly degraded within the cells by both the proteasome and autophagy. Both degradation pathways were dependent on a functional ubiquitin-conjugation system as treatment with MLN7243 increased levels of non-cleavable NEDD8-GFP. The degradation of non-cleavable, N-terminal NEDD8-GFP was not due to a failure of GFP folding as different NEDD8-GFP constructs with differing abilities to fold and fluoresce were similarly degraded. Though the fusion of NEDD8 to a protein resulted in degradation, treatment of cells with MLN4924, an inhibitor of the E1 activating enzyme for NEDD8, failed to prevent degradation of other destabilized substrates. Taken together these data suggest that under certain conditions, such as the model system described here, the covalent linkage of NEDD8 to a protein substrate may result in the target proteins degradation.

Indexed as

ProteolysisAnimalsAutophagosomesCell LineFluorescenceGreen Fluorescent ProteinsHalf-LifeHumansMiceNEDD8 ProteinProteasome Endopeptidase ComplexProtein FoldingPyrazolesPyrimidinesRecombinant Fusion ProteinsSulfidesGreen Fluorescent ProteinsNEDD8 ProteinProteasome Endopeptidase ComplexPyrazolesPyrimidinesRecombinant Fusion ProteinsSulfidesSulfonamidesTAK-243UbiquitinNEDD8proteasomeprotein degradationubiquitination

Identifiers

PMID33918652
PMCPMC8069691
OpenAlexW3156103783

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.