Evidence map›Paper›PMID 33917499›Full record

ArticlePlants (Basel, Switzerland)2021

Genetic Mapping by Sequencing More Precisely Detects Loci Responsible for Anaerobic Germination Tolerance in Rice.

John Carlos I Ignacio, Maricris Zaidem, Carlos Casal, Shalabh Dixit, Tobias Kretzschmar, Jaime M Samaniego, Merlyn S Mendioro, Detlef Weigel, Endang M Septiningsih

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 5 countries.

John Carlos I IgnacioInternational Rice Research Institute, DAPO Box 7777, Metro Manila 1301, Philippines.ORCID 0000-0002-1799-7316
Maricris ZaidemDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany.
Carlos CasalInternational Rice Research Institute, DAPO Box 7777, Metro Manila 1301, Philippines.
Shalabh DixitInternational Rice Research Institute, DAPO Box 7777, Metro Manila 1301, Philippines.
Tobias KretzschmarInternational Rice Research Institute, DAPO Box 7777, Metro Manila 1301, Philippines.
Jaime M SamaniegoUniversity of the Philippines, Los Baños, Laguna 4031, Philippines.
Merlyn S MendioroUniversity of the Philippines, Los Baños, Laguna 4031, Philippines.
Detlef WeigelDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany.ORCID 0000-0002-2114-7963
Endang M SeptiningsihInternational Rice Research Institute, DAPO Box 7777, Metro Manila 1301, Philippines.ORCID 0000-0002-9481-304X
International Rice Research Institute · PHUniversity of the Philippines Los Baños · PHMax Planck Institute for Developmental Biology · DEUniversity of Oxford · GB

Funding

Bundesministerium für Wirtschaftliche Zusammenarbeit und Entwicklung 81157485
6 · The paper itself

Abstract

Direct seeded rice (DSR) is a mainstay for planting rice in the Americas, and it is rapidly becoming more popular in Asia. It is essential to develop rice varieties that are suitable for this type of production system. ASD1, a landrace from India, possesses several traits desirable for direct-seeded fields, including tolerance to anaerobic germination (AG). To map the genetic basis of its tolerance, we examined a population of 200 F

Indexed as

anaerobic germination (AG)quantitative trait locus (QTL)RAD-seqrice (Oryza sativa)sequencing based genotyping

Identifiers

PMID33917499
PMCPMC8067528
OpenAlexW3143739122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.