Evidence map›Paper›PMID 33916420›Full record

ArticleAntibiotics (Basel, Switzerland)2021

Binding and Action of Triphenylphosphonium Analog of Chloramphenicol upon the Bacterial Ribosome.

Chih-Wei Chen, Julia A Pavlova, Dmitrii A Lukianov, Andrey G Tereshchenkov, Gennady I Makarov, Zimfira Z Khairullina, Vadim N Tashlitsky, Alena Paleskava, Andrey L Konevega, Alexey A Bogdanov and 3 more

Open access · goldAbstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Chih-Wei ChenDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, IL 60607, USA.ORCID 0000-0001-7493-3944
Julia A PavlovaDepartment of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Dmitrii A LukianovCenter of Life Sciences, Skolkovo Institute of Science and Technology, 143028 Skolkovo, Russia.
Andrey G TereshchenkovA.N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.
Gennady I MakarovLaboratory of Multiscale Modeling of Multicomponent Materials, South Ural State University, 454080 Chelyabinsk, Russia.
Zimfira Z KhairullinaDepartment of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Vadim N TashlitskyDepartment of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Alena PaleskavaPetersburg Nuclear Physics Institute, National Research Center (NRC) "Kurchatov Institute", 188300 Gatchina, Russia.
Andrey L KonevegaPetersburg Nuclear Physics Institute, National Research Center (NRC) "Kurchatov Institute", 188300 Gatchina, Russia.ORCID 0000-0003-0125-7150
Alexey A BogdanovDepartment of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Ilya A OstermanDepartment of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.ORCID 0000-0001-7748-980X
Natalia V SumbatyanDepartment of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Yury S PolikanovDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, IL 60607, USA.ORCID 0000-0002-5064-0327
Lomonosov Moscow State University · RUPeter the Great St. Petersburg Polytechnic University · RUSkolkovo Institute of Science and Technology · RUUniversity of Illinois Chicago · USSouth Ural State University · RU

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Molecular mechanisms of action of ribosome-targeting antibiotics.R01GM132302 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI POLIKANOV, YURY · 2019 to 2022
$1.3M
NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R01 GM132302NIH HHS R01-GM132302NIH HHS S10 OD021527
6 · The paper itself

Abstract

Chloramphenicol (CHL) is a ribosome-targeting antibiotic that binds to the peptidyl transferase center (PTC) of the bacterial ribosome and inhibits peptide bond formation. As an approach for modifying and potentially improving the properties of this inhibitor, we explored ribosome binding and inhibitory properties of a semi-synthetic triphenylphosphonium analog of CHL-CAM-C4-TPP. Our data demonstrate that this compound exhibits a ~5-fold stronger affinity for the bacterial ribosome and higher potency as an in vitro protein synthesis inhibitor compared to CHL. The X-ray crystal structure of the

Indexed as

70S ribosomeantibioticbinding affinitychloramphenicolnascent peptide exit tunnelpeptidyl transferase centertranslation inhibitorX-ray structure

Identifiers

PMID33916420
PMCPMC8066774
OpenAlexW3151656340

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.