Evidence map›Paper›PMID 33914877›Full record

ArticleGenetics2021

Allele-specific suppression in Caenorhabditis elegans reveals details of EMS mutagenesis and a possible moonlighting interaction between the vesicular acetylcholine transporter and ERD2 receptors.

Eleanor A Mathews, Dave Stroud, Gregory P Mullen, Gavriil Gavriilidis, Janet S Duerr, James B Rand, Jonathan Hodgkin

Open access · hybridAbstract read
In one paragraph

Article in Genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Eleanor A MathewsOklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
Dave StroudDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Gregory P MullenOklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
Gavriil GavriilidisDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Janet S DuerrOklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.ORCID 0000-0002-7582-2901
James B RandOklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.ORCID 0000-0002-1317-7783
Jonathan HodgkinDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Oklahoma Medical Research Foundation · USUniversity of Oxford · GBOklahoma City University · US

Funding

Medical Research Council MR/J001309/1
6 · The paper itself

Abstract

A missense mutant, unc-17(e245), which affects the Caenorhabditis elegans vesicular acetylcholine transporter UNC-17, has a severe uncoordinated phenotype, allowing efficient selection of dominant suppressors that revert this phenotype to wild-type. Such selections permitted isolation of numerous suppressors after EMS (ethyl methanesulfonate) mutagenesis, leading to demonstration of delays in mutation fixation after initial EMS treatment, as has been shown in T4 bacteriophage but not previously in eukaryotes. Three strong dominant extragenic suppressor loci have been defined, all of which act specifically on allele e245, which causes a G347R mutation in UNC-17. Two of the suppressors (sup-1 and sup-8/snb-1) have previously been shown to encode synaptic proteins able to interact directly with UNC-17. We found that the remaining suppressor, sup-2, corresponds to a mutation in erd-2.1, which encodes an endoplasmic reticulum retention protein; sup-2 causes a V186E missense mutation in transmembrane helix 7 of ERD-2.1. The same missense change introduced into the redundant paralogous gene erd-2.2 also suppressed unc-17(e245). Suppression presumably occurred by compensatory charge interactions between transmembrane helices of UNC-17 and ERD-2.1 or ERD-2.2, as previously proposed in work on suppression by SUP-1(G84E) or SUP-8(I97D)/synaptobrevin. erd-2.1(V186E) homozygotes were fully viable, but erd-2.1(V186E); erd-2.2(RNAi) exhibited synthetic lethality [like erd-2.1(RNAi); erd-2.2(RNAi)], indicating that the missense change in ERD-2.1 impairs its normal function in the secretory pathway but may allow it to adopt a novel moonlighting function as an unc-17 suppressor.

Indexed as

Genes, SuppressorAnimalsBinding SitesCaenorhabditis elegansCaenorhabditis elegans ProteinsMembrane ProteinsMutation, MissenseProtein BindingSynapsesSynthetic Lethal MutationsVesicular Acetylcholine Transport ProteinsCaenorhabditis elegans ProteinsMembrane ProteinsSup-1 protein, C elegansUnc-17 protein, C elegansVesicular Acetylcholine Transport Proteinsacetylcholine transporterCaenorhabditis elegansEMS mutagenesisgenetic suppressionKDEL receptormoonlightingprotein interactionsynapse

Identifiers

PMID33914877
PMCPMC8664489
OpenAlexW3158946250

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.