Evidence map›Paper›PMID 33914747›Full record

ArticlePLoS genetics2021

The genomics of rapid climatic adaptation and parallel evolution in North American house mice.

Kathleen G Ferris, Andreas S Chavez, Taichi A Suzuki, Elizabeth J Beckman, Megan Phifer-Rixey, Ke Bi, Michael W Nachman

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  3. bioRxiv : the preprint server for biology · 2026
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  7. Phenotypic and developmental dissection of an instance of the island rule.Evolution; international journal of organic evolution · 2025
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  11. Competing adaptations maintain nonadaptive variation in a wild cricket population.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
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  15. Article
  16. Article
  17. Environmentally robustProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Detecting parallel polygenic adaptation to novel evolutionary pressure in wild populations: a case study in Atlantic cod (Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kathleen G FerrisMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.
Andreas S ChavezMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.
Taichi A SuzukiMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0001-7800-8596
Elizabeth J BeckmanMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0002-8303-2475
Megan Phifer-RixeyMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.
Ke BiMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.
Michael W NachmanMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0003-4321-5135
Museum of Vertebrate Zoology · US

Funding

Natural selection and DNA sequence variation in MusR01GM074245 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI NACHMAN, MICHAEL W. · 2005 to 2015
$3.0M
The genomic basis of environmental adaptation in miceR01GM127468 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI NACHMAN, MICHAEL W. · 2018 to 2021
$1.3M
NIGMS NIH HHS R01 GM074245NIGMS NIH HHS R01 GM127468
6 · The paper itself

Abstract

Parallel changes in genotype and phenotype in response to similar selection pressures in different populations provide compelling evidence of adaptation. House mice (Mus musculus domesticus) have recently colonized North America and are found in a wide range of environments. Here we measure phenotypic and genotypic differentiation among house mice from five populations sampled across 21° of latitude in western North America, and we compare our results to a parallel latitudinal cline in eastern North America. First, we show that mice are genetically differentiated between transects, indicating that they have independently colonized similar environments in eastern and western North America. Next, we find genetically-based differences in body weight and nest building behavior between mice from the ends of the western transect which mirror differences seen in the eastern transect, demonstrating parallel phenotypic change. We then conduct genome-wide scans for selection and a genome-wide association study to identify targets of selection and candidate genes for body weight. We find some genomic signatures that are unique to each transect, indicating population-specific responses to selection. However, there is significant overlap between genes under selection in eastern and western house mouse transects, providing evidence of parallel genetic evolution in response to similar selection pressures across North America.

Indexed as

Evolution, MolecularAcclimatizationAdaptation, PhysiologicalAnimalsBody WeightGenetic VariationGenome-Wide Association StudyGenomicsMiceNorth AmericaPhenotypeSelection, Genetic

Identifiers

PMID33914747
PMCPMC8084166
OpenAlexW3157565621

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.