ArticleInternational journal for numerical methods in biomedical engineering2021
Combining data assimilation and machine learning to build data-driven models for unknown long time dynamics-Applications in cardiovascular modeling.
Article in International journal for numerical methods in biomedical engineering, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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11 citing papers in PubMed, 26 citations in OpenAlex.
- A Real-Time Digital Twin for Human Cardiovascular Applications.International journal for numerical methods in biomedical engineering · 2026Article
- Learning cardiac activation and repolarization times with operator learning.PLoS computational biology · 2026Article
- Whole-heart electromechanical simulations using Latent Neural Ordinary Differential Equations.NPJ digital medicine · 2024Article
- Integration of machine learning to identify diagnostic genes in leukocytes for acute myocardial infarction patients.Journal of translational medicine · 2023Article
- A Systems Analysis of Phenotype Heterogeneity in APOE*3Leiden.CETP Mice Induced by Long-Term High-Fat High-Cholesterol Diet Feeding.Nutrients · 2022Article
- From evidence-based medicine to digital twin technology for predicting ventricular tachycardia in ischaemic cardiomyopathy.Journal of the Royal Society, Interface · 2022Article
- Inverse problems in blood flow modeling: A review.International journal for numerical methods in biomedical engineering · 2022Review
- Identification of useful genes from multiple microarrays for ulcerative colitis diagnosis based on machine learning methods.Scientific reports · 2022Article
- Multiple-model machine learning identifies potential functional genes in dilated cardiomyopathy.Frontiers in cardiovascular medicine · 2022Article
- Biomechanical Modeling to Inform Pulmonary Valve Replacement in Tetralogy of Fallot Patients After Complete Repair.The Canadian journal of cardiology · 2021Observational
- Combining data assimilation and machine learning to build data-driven models for unknown long time dynamics-Applications in cardiovascular modeling.International journal for numerical methods in biomedical engineering · 2021Article
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Authors and funding
3 authors at 1 institution in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We propose a method to discover differential equations describing the long-term dynamics of phenomena featuring a multiscale behavior in time, starting from measurements taken at the fast-scale. Our methodology is based on a synergetic combination of data assimilation (DA), used to estimate the parameters associated with the known fast-scale dynamics, and machine learning (ML), used to infer the laws underlying the slow-scale dynamics. Specifically, by exploiting the scale separation between the fast and the slow dynamics, we propose a decoupling of time scales that allows to drastically lower the computational burden. Then, we propose a ML algorithm that learns a parametric mathematical model from a collection of time series coming from the phenomenon to be modeled. Moreover, we study the interpretability of the data-driven models obtained within the black-box learning framework proposed in this paper. In particular, we show that every model can be rewritten in infinitely many different equivalent ways, thus making intrinsically ill-posed the problem of learning a parametric differential equation starting from time series. Hence, we propose a strategy that allows to select a unique representative model in each equivalence class, thus enhancing the interpretability of the results. We demonstrate the effectiveness and noise-robustness of the proposed methods through several test cases, in which we reconstruct several differential models starting from time series generated through the models themselves. Finally, we show the results obtained for a test case in the cardiovascular modeling context, which sheds light on a promising field of application of the proposed methods.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.