Evidence map›Paper›PMID 33909852›Full record

ArticleRevista do Instituto de Medicina Tropical de Sao Paulo2021

Colistin-resistant Escherichia coli belonging to different sequence types: genetic characterization of isolates responsible for colonization, community- and healthcare-acquired infections.

Yrving Paiva, Debora Satie Nagano, Andre Luis Franco Cotia, Thais Guimarães, Roberta Cristina Ruedas Martins, Lauro Vieira Perdigão Neto, Marina Farrel Côrtes, Ana Paula Marchi, Louise Corscadden, Anna Silva Machado and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Revista do Instituto de Medicina Tropical de Sao Paulo, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Transmission ofEmerging microbes & infections · 2024
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  4. Identification ofAntibiotics (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Fecal Shedding of Multidrug ResistantAntibiotics (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Yrving PaivaUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Debora Satie NaganoUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.ORCID http://orcid.org/0000-0001-5994-8582
Andre Luis Franco CotiaUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Thais GuimarãesInstituto de Assistência Médica ao Servidor Público Estadual de São Paulo, São Paulo, Brazil.
Roberta Cristina Ruedas MartinsUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Lauro Vieira Perdigão NetoUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Marina Farrel CôrtesUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Ana Paula MarchiUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Louise CorscaddenUniversity of Leicester, Leicester, United Kingdom.
Anna Silva MachadoHospital Totalcor, São Paulo, São Paulo, Brazil.
Alexandre Inácio de PaulaInstituto de Assistência Médica ao Servidor Público Estadual de São Paulo, São Paulo, Brazil.
Lucas Augusto Moyses FrancoUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-6034-920X
Patricia Regina NevesUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Anna Sara LevinUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.
Silvia Figueiredo CostaUniversidade de São Paulo, Instituto de Medicina Tropical de São Paulo, São Paulo, São Paulo, Brazil.ORCID http://orcid.org/0000-0003-1087-752X
Universidade de São Paulo · BRHospital do Servidor Público Estadual · BRHospital TotalCor · BRUniversity of Leicester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plasmid-mediated colistin-resistance gene named mcr-1 has been recently described in different countries and it became a public health challenge. Of note, few studies have addressed the spread of Escherichia coli harboring the mcr-1 gene in both, community and hospital settings. A total of seven colistin-resistant E. coli carrying mcr-1, collected from 2016 to 2018, from community (n=4), healthcare-acquired infections (n=2) and colonization (n=1) were identified in three high complexity hospitals in Sao Paulo, Brazil. These colistin-resistant isolates were screened for mcr genes by PCR and all strains were submitted to Whole Genome Sequencing and the conjugation experiment. The seven strains belonged to seven distinct sequence types (ST744, ST131, ST69, ST48, ST354, ST57, ST10), and they differ regarding the resistance profiles. Transference of mcr-1 by conjugation to E. coli strain C600 was possible in five of the seven isolates. The mcr-1 gene was found in plasmid types IncX4 or IncI2. Three of the isolates have ESBL-encoding genes (blaCTX-M-2, n=2; blaCTX-M-8, n=1). We hereby report genetically distinct E. coli isolates, belonging to seven STs, harboring the mcr-1 gene, associated to community and healthcare-acquired infections, and colonization in patients from three hospitals in Sao Paulo. These findings point out for the potential spread of plasmid-mediated colistin-resistance mechanism in E. coli strains in Brazil.

Indexed as

ColistinEscherichia coli ProteinsAnti-Bacterial AgentsBrazilDelivery of Health CareEscherichia coliHumansMicrobial Sensitivity TestsAnti-Bacterial AgentsColistinEscherichia coli ProteinsMCR-1 protein, E coli

Identifiers

PMID33909852
PMCPMC8075621
OpenAlexW3157475262

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.