Evidence map›Paper›PMID 33909619›Full record

Observational studyPLoS neglected tropical diseases2021

Diagnostic performance of a Recombinant Polymerase Amplification Test-Lateral Flow (RPA-LF) for cutaneous leishmaniasis in an endemic setting of Colombia.

Alexandra Cossio, Jimena Jojoa, María Del Mar Castro, Ruth Mabel Castillo, Lyda Osorio, Thomas R Shelite, Nancy Gore Saravia, Peter C Melby, Bruno L Travi

Registry-linked trialOpen access · goldAbstract readObservational Study
In one paragraph

Observational study in PLoS neglected tropical diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04500873 (Diagnostic Performance of a Recombinant Polymerase Amplification Test - Lateral Flow), which is not on this map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04500873 completednot on this map

Diagnostic Performance of a Recombinant Polymerase Amplification Test - Lateral Flow (RPA-LF) for Cutaneous Leishmaniasis in an Endemic Setting of Colombia

TypeobservationalSponsorCentro Internacional de Entrenamiento e Investigaciones MédicasRan2018 to 2019Enrolled128ConditionsCutaneous Leishmaniasis (Diagnosis)
3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  13. Novel CRISPR-based detection ofFrontiers in microbiology · 2022
    Article
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  15. Rapid Detection ofFrontiers in cellular and infection microbiology · 2022
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Alexandra CossioCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM, Cali, Colombia.ORCID 0000-0002-2247-5459
Jimena JojoaCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM, Cali, Colombia.
María Del Mar CastroCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM, Cali, Colombia.ORCID 0000-0002-0485-2919
Ruth Mabel CastilloCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM, Cali, Colombia.
Lyda OsorioUniversidad del Valle, Cali, Colombia.ORCID 0000-0002-5121-4741
Thomas R SheliteUniversity of Texas Medical Branch, Galveston, Texas, United States of America.ORCID 0000-0001-6686-6032
Nancy Gore SaraviaCentro Internacional de Entrenamiento e Investigaciones Médicas, CIDEIM, Cali, Colombia.
Peter C MelbyUniversity of Texas Medical Branch, Galveston, Texas, United States of America.
Bruno L TraviUniversity of Texas Medical Branch, Galveston, Texas, United States of America.ORCID 0000-0003-4160-302X
Centro Internacional de Entrenamiento e Investigaciones Medicas · COThe University of Texas Medical Branch at Galveston · USUniversidad del Valle · CO

Funding

Vector/Host-Parasite Interface of Leishmaniasis in ColombiaD43TW006589 · FIC · YALE UNIVERSITY · PI GORE SARAVIA, NANCY, TSCHUDI, CHRISTIAN · 2003 to 2024
$4.3M
FIC NIH HHS D43 TW006589
6 · The paper itself

Abstract

backgroundControl of cutaneous leishmaniasis by public health systems in the Americas relies on case identification and treatment. Point-of-care diagnostics that can be performed by health workers within or near affected communities could effectively bring the health system to the resource-limited sites providing early diagnosis and treatment, reducing morbidity and the burden of disease. METHODOLOGY/PRINCIPAL

findingsA cross-sectional study was undertaken to evaluate the diagnostic test performance of Isothermal Recombinase Polymerase Amplification (RPA) targeting Leishmania kinetoplast DNA, coupled with a lateral flow (LF) immunochromatographic strip, in a field setting and a laboratory reference center. Minimally invasive swab and FTA filter paper samples were obtained by community health workers and highly trained technicians from ulcerated lesions of > 2 weeks' evolution from 118 patients' ≥ 2 years of age in the municipality of Tumaco, Nariño. Extracted DNA was processed by RPA-LF at a reference center or in a primary health facility in the field. Evaluation was based on a composite "gold standard" that included microscopy, culture, biopsy and real-time polymerase chain reaction detection of Leishmania 18S rDNA. Standard of care routine diagnostic tests were explored as comparators. Sensitivity and specificity of RPA-LF in the reference lab scenario were 87% (95%CI 74-94) and 86% (95%CI 74-97), respectively. In the field scenario, the sensitivity was 75% (95%CI 65-84) and specificity 89% (95%CI 78-99). Positive likelihood ratios in both scenarios were higher than 6 while negative likelihood ratios ranged to 0.2-0.3 supporting the usefulness of RPA-LF to rule-in and potentially to rule-out infection. CONCLUSIONS/SIGNIFICANCE: The low complexity requirements of RPA-LF combined with non-invasive sampling support the feasibility of its utilization by community health workers with the goal of strengthening the diagnostic capacity for cutaneous leishmaniasis in Colombia.

trial registrationClinicalTrials.gov NCT04500873.

Indexed as

AdolescentAdultAgedAged, 80 and overChildChild, PreschoolChromatography, AffinityColombiaCross-Sectional StudiesDNA, KinetoplastDNA PrimersDNA, ProtozoanFemaleHumansLeishmaniaLeishmaniasis, CutaneousDNA, KinetoplastDNA PrimersDNA, Protozoan

Identifiers

PMID33909619
PMCPMC8081229
OpenAlexW3159435563

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.