Evidence map›Paper›PMID 33909136›Full record

ArticleJournal of mathematical biology2021

Separation of timescales for the seed bank diffusion and its jump-diffusion limit.

Jochen Blath, Eugenio Buzzoni, Adrián González Casanova, Maite Wilke Berenguer

Open access · hybridAbstract read
In one paragraph

Article in Journal of mathematical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 100% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 0 citations in OpenAlex.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Jochen BlathInstitut für Mathematik, Technische Universität Berlin, Berlin, Germany.
Eugenio BuzzoniInstitut für Mathematik, Technische Universität Berlin, Berlin, Germany.
Adrián González CasanovaInstituto de Matemáticas, Universidad Nacional Autónoma de México, Mexico City, Mexico.
Maite Wilke BerenguerFakultät für Mathematik, Ruhr-Universität Bochum, Bochum, Germany. maite.wilkeberenguer@ruhr-uni-bochum.de.ORCID 0000-0002-6057-495X
Technische Universität Berlin · DERuhr University Bochum · DEUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigate scaling limits of the seed bank model when migration (to and from the seed bank) is 'slow' compared to reproduction. This is motivated by models for bacterial dormancy, where periods of dormancy can be orders of magnitude larger than reproductive times. Speeding up time, we encounter a separation of timescales phenomenon which leads to mathematically interesting observations, in particular providing a prototypical example where the scaling limit of a continuous diffusion will be a jump diffusion. For this situation, standard convergence results typically fail. While such a situation could in principle be attacked by the sophisticated analytical scheme of Kurtz (J Funct Anal 12:55-67, 1973), this will require significant technical efforts. Instead, in our situation, we are able to identify and explicitly characterise a well-defined limit via duality in a surprisingly non-technical way. Indeed, we show that moment duality is in a suitable sense stable under passage to the limit and allows a direct and intuitive identification of the limiting semi-group while at the same time providing a probabilistic interpretation of the model. We also obtain a general convergence strategy for continuous-time Markov chains in a separation of timescales regime, which is of independent interest.

Indexed as

Models, BiologicalSeed BankTimeDiffusionMarkov ChainsDiffusion limitsDualityJump-diffusionSeparation of timescalesStrong seed bankTwo-island model

Identifiers

PMID33909136
PMCPMC8081708
OpenAlexW2924393552

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.