Evidence map›Paper›PMID 33907372›Full record

ArticleMolecular vision2021

A novel homozygous missense mutation p.P388S in

DaNae R Woodard, Chao Xing, Pratyusha Ganne, Hanquan Liang, Avinash Mahindrakar, Chandrasekhar Sankurathri, John D Hulleman, V Vinod Mootha

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Deciphering complexity:Frontiers in genetics · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Genetic dissection of non-syndromic retinitis pigmentosa.Indian journal of ophthalmology · 2022
    Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

DaNae R WoodardDepartment of Ophthalmology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
Chao XingMcDermott Center for Human Growth and Development/Center for Human Genetics, University of Texas Southwestern Medical Center, Dallas, TX.
Pratyusha GanneSrikiran Institute of Ophthalmology, Kakinada, Andhra Pradesh, India.
Hanquan LiangMcDermott Center for Human Growth and Development/Center for Human Genetics, University of Texas Southwestern Medical Center, Dallas, TX.
Avinash MahindrakarSrikiran Institute of Ophthalmology, Kakinada, Andhra Pradesh, India.
Chandrasekhar SankurathriSrikiran Institute of Ophthalmology, Kakinada, Andhra Pradesh, India.
John D HullemanDepartment of Ophthalmology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
V Vinod MoothaDepartment of Ophthalmology, University of Texas Southwestern Medical Center, Dallas, Texas, United States.
The University of Texas Southwestern Medical Center · USAll India Institute of Medical Sciences · IN

Funding

Stem Cell, Organoid and Cell Phenotyping ModuleP30EY030413 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI W MATTHEW PETROLL · 2019 to 2026
$5.9M
Supplement to Promote Diversity in Health-Related Research - Prevention of macular pathophysiology...Parent GrantR01EY027785 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI John Douglas Hulleman · 2018 to 2026
$2.8M
NEI NIH HHS P30 EY030413NEI NIH HHS R01 EY027785
6 · The paper itself

Abstract

Purpose: Retinitis pigmentosa (RP) is an inherited retinal disorder that results in the degeneration of photoreceptor cells, ultimately leading to severe visual impairment. We characterized a consanguineous family from Southern India wherein a 25 year old individual presented with night blindness since childhood. The purpose of this study was to identify the causative mutation for RP in this individual as well as characterize how the mutation may ultimately affect protein function. Methods: We performed a complete ophthalmologic examination of the proband followed by exome sequencing. The likely causative mutation was identified and modeled in cultured cells, evaluating its expression, solubility (both with western blotting), subcellular distribution, (confocal microscopy), and testing whether this variant induced endoplasmic reticulum (ER) stress (quantitative PCR [qPCR] and western blotting). Results: The proband presented with generalized and parafoveal retinal pigmented epithelium (RPE) atrophy with bone spicule-like pigmentation in the midperiphery and arteriolar attenuation. Optical coherence tomography scans through the macula of both eyes showed atrophy of the outer retinal layers with loss of the ellipsoid zone, whereas the systemic examination of this individual was normal. The proband's parents and sibling were asymptomatic and had normal funduscopic examinations. We discovered a novel homozygous p.Pro388Ser mutation in the Conclusions: These results add to the list of known mutations in

Indexed as

AdultBlotting, WesternConsanguinityElectroretinographyExome SequencingEye ProteinsHomozygoteHumansIndiaMaleMicroscopy, ConfocalMutation, MissensePedigreeReal-Time Polymerase Chain ReactionRetinitis PigmentosaTomography, Optical CoherenceEye ProteinsTULP1 protein, human

Identifiers

PMID33907372
PMCPMC8056470
OpenAlexW3159116007

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.