Evidence map›Paper›PMID 33907062›Full record

ArticleMicrobes and environments2021

Utilizing Cattle Manure Compost Increases Ammonia Monooxygenase A Gene Expression and Ammonia-oxidizing Activity of Both Bacteria and Archaea in Biofiltration Media for Ammonia Deodorization.

Rika Kitamura, Toshinori Kozaki, Kazuo Ishii, Masayuki Iigo, Takeshi Kurokura, Kenji Yamane, Isamu Maeda, Kazunori Iwabuchi, Takahiro Saito

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Rika KitamuraCenter for Bioscience Research and Education, Utsunomiya University.
Toshinori KozakiDepartment of Applied Biological Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology.
Kazuo IshiiBiostatistics Center, Kurume University.
Masayuki IigoDepartment of Applied Biological Chemistry, Faculty of Agriculture, Utsunomiya University.
Takeshi KurokuraDepartment of Agrobiology and Bioresources, Faculty of Agriculture, Utsunomiya University.
Kenji YamaneDepartment of Agrobiology and Bioresources, Faculty of Agriculture, Utsunomiya University.
Isamu MaedaDepartment of Applied Biological Chemistry, Faculty of Agriculture, Utsunomiya University.
Kazunori IwabuchiDepartment of Bioresource and Environmental Engineering, Faculty of Agriculture, Hokkaido University.
Takahiro SaitoDepartment of Environmental Engineering, Faculty of Agriculture, Utsunomiya University.
Utsunomiya University · JPBioscience Research · USHokkaido University · JPKurume University · JPTokyo University of Agriculture and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Malodorous emissions are a crucial and inevitable issue during the decomposition of biological waste and contain a high concentration of ammonia. Biofiltration technology is a feasible, low-cost, energy-saving method that reduces and eliminates malodors without environmental impact. In the present study, we evaluated the effectiveness of compost from cattle manure and food waste as deodorizing media based on their removal of ammonia and the expression of ammonia-oxidizing genes, and identified the bacterial and archaeal communities in these media. Ammonia was removed by cattle manure compost, but not by food waste compost. The next-generation sequencing of 16S ribosomal RNA obtained from cattle manure compost revealed the presence of ammonia-oxidizing bacteria (AOB), including Cytophagia, Alphaproteobacteria, and Gammaproteobacteria, and ammonia-oxidizing archaea (AOA), such as Thaumarchaeota. In cattle manure compost, the bacterial and archaeal ammonia monooxygenase A (amoA) genes were both up-regulated after exposure to ammonia (fold ratio of 14.2±11.8 after/before), and the bacterial and archaeal communities were more homologous after than before exposure to ammonia, which indicates the adaptation of these communities to ammonia. These results suggest the potential of cattle manure compost as an efficient biological deodorization medium due to the activation of ammonia-oxidizing microbes, such as AOB and AOA, and the up-regulation of their amoA genes.

Indexed as

AmmoniaAnimalsArchaeaArchaeal ProteinsBacteriaBacterial ProteinsCattleCompostingFiltrationManureOxidation-ReductionOxidoreductasesPhylogenyAmmoniaammonia monooxygenaseArchaeal ProteinsBacterial ProteinsManureOxidoreductasesamoA geneAOAAOBbiofiltration technologymicrobial community

Identifiers

PMID33907062
PMCPMC8209447
OpenAlexW3159022151

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.