Evidence map›Paper›PMID 33905520›Full record

ArticleNucleic acids research2021

Inhibition of DNA replication initiation by silver nanoclusters.

Yu Tao, Tomas Aparicio, Mingqiang Li, Kam W Leong, Shan Zha, Jean Gautier

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Biogenic Silver Nanoparticles from Two Varieties ofMolecules (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yu TaoInstitute for Cancer Genetics, Columbia University, New York, NY 10032, USA.
Tomas AparicioInstitute for Cancer Genetics, Columbia University, New York, NY 10032, USA.ORCID 0000-0001-5492-4733
Mingqiang LiDepartment of Biomedical Engineering, Columbia University, New York, NY 10027, USA.
Kam W LeongDepartment of Biomedical Engineering, Columbia University, New York, NY 10027, USA.
Shan ZhaInstitute for Cancer Genetics, Columbia University, New York, NY 10032, USA.
Jean GautierInstitute for Cancer Genetics, Columbia University, New York, NY 10032, USA.ORCID 0000-0002-6348-6023
Cancer Genetics (United States) · USColumbia University · USColumbia University Irving Medical Center · US

Funding

The Role of CTIP in Lymphocyte Development and LymphomagenesisP01CA174653 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RABADAN, RAUL · 2014 to 2024
$17.6M
DNA Repair and Genomic Instability in Cancer Development and TherapyR35CA197606 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GAUTIER, JEAN · 2015 to 2021
$5.7M
The role of ATM in the suppression of lymphoid malignancyR01CA158073 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Shan Zha · 2011 to 2026
$5.7M
The structural function of ATR in development, oncogenesis and cancer therapyR01CA215067 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHA, SHAN · 2017 to 2021
$1.9M
Multiscale proteomics studies of DNA repair and genomic stabilityR50CA233182 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI APARICIO CASADO, TOMAS · 2018 to 2022
$812k
NCI NIH HHS P01 CA174653NCI NIH HHS R01 CA158073NCI NIH HHS R01 CA215067NCI NIH HHS R35 CA197606NCI NIH HHS R50 CA233182
6 · The paper itself

Abstract

Silver nanoclusters (AgNCs) have outstanding physicochemical characteristics, including the ability to interact with proteins and DNA. Given the growing number of diagnostic and therapeutic applications of AgNCs, we evaluated the impact of AgNCs on DNA replication and DNA damage response in cell-free extracts prepared from unfertilized Xenopus laevis eggs. We find that, among a number of silver nanomaterials, AgNCs uniquely inhibited genomic DNA replication and abrogated the DNA replication checkpoint in cell-free extracts. AgNCs did not affect nuclear membrane or nucleosome assembly. AgNCs-supplemented extracts showed a strong defect in the loading of the mini chromosome maintenance (MCM) protein complex, the helicase that unwinds DNA ahead of replication forks. FLAG-AgNCs immunoprecipitation and mass spectrometry analysis of AgNCs associated proteins demonstrated direct interaction between MCM and AgNCs. Our studies indicate that AgNCs directly prevent the loading of MCM, blocking pre-replication complex (pre-RC) assembly and subsequent DNA replication initiation. Collectively, our findings broaden the scope of silver nanomaterials experimental applications, establishing AgNCs as a novel tool to study chromosomal DNA replication.

Indexed as

DNA ReplicationNanostructuresSilverAnimalsMinichromosome Maintenance ProteinsXenopus laevisMinichromosome Maintenance ProteinsSilver

Identifiers

PMID33905520
PMCPMC8136792
OpenAlexW3157971741

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.