Evidence map›Paper›PMID 33905237›Full record

ArticleACS sensors2021

A Bimodal Nanosensor for Probing Influenza Fusion Protein Activity Using Magnetic Relaxation.

Vedant Jain, Tyler Shelby, Truptiben Patel, Elena Mekhedov, Jennifer D Petersen, Joshua Zimmerberg, Ahinsa Ranaweera, David P Weliky, Prasad Dandawate, Shrikant Anant and 4 more

Open access · greenAbstract read
In one paragraph

Article in ACS sensors, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 93% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Vedant JainDepartment of Chemistry, Pittsburg State University, Pittsburg, Kansas 66762, United States.
Tyler ShelbyDepartment of Chemistry, Pittsburg State University, Pittsburg, Kansas 66762, United States.
Truptiben PatelDepartment of Chemistry, Pittsburg State University, Pittsburg, Kansas 66762, United States.
Elena MekhedovSection on Integrative Biophysics, Division of Basic and Translational Biophysics, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, United States.
Jennifer D PetersenSection on Integrative Biophysics, Division of Basic and Translational Biophysics, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, United States.
Joshua ZimmerbergSection on Integrative Biophysics, Division of Basic and Translational Biophysics, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, United States.
Ahinsa RanaweeraDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.
David P WelikyDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.ORCID 0000-0002-2765-5950
Prasad DandawateDepartment of Molecular and Integrative Physiology and Department of Surgery, The University of Kansas Medical Center, Kansas City, Kansas 66160, United States.
Shrikant AnantDepartment of Molecular and Integrative Physiology and Department of Surgery, The University of Kansas Medical Center, Kansas City, Kansas 66160, United States.
Shoukath SulthanaDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma 74078, United States.
Yolanda VasquezDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma 74078, United States.ORCID 0000-0002-3991-5975
Tuhina BanerjeeDepartment of Chemistry, Pittsburg State University, Pittsburg, Kansas 66762, United States.
Santimukul SantraDepartment of Chemistry, Pittsburg State University, Pittsburg, Kansas 66762, United States.ORCID 0000-0002-5047-5245
Pittsburg State University · USNational Institutes of Health · USMichigan State University · USOklahoma State University · USUniversity of Kansas Medical Center · US

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SUSAN J. BROWN · 2012 to 2026
$63.0M
Membrane Remodeling in Viral Infection, Parasite Replication, and Traumatic Brain InjuryZIAHD001409 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI ZIMMERBERG, JOSHUA · 2009 to 2025
$29.9M
Research Mentoring and Building Capacity of underrepresented Minority Research Scientists in India.D43TW010540 · FIC · YALE UNIVERSITY · PI MICHELE BARRY, Eva Harris · 2017 to 2026
$15.5M
Solid State NMR Studies of the HIV-1 Fusion PeptideR01AI047153 · NIAID · MICHIGAN STATE UNIVERSITY · PI WELIKY, DAVID P · 2001 to 2021
$5.6M
"Magnetic Resonance Nanosensors for the Rapid Diagnosis of Influenza and Investigation of Viral Binding and Fusion Mechanisms"R03AI132832 · NIAID · PITTSBURG STATE UNIVERSITY · PI SANTRA, SANTIMUKUL · 2017 to 2018
$138k
FIC NIH HHS D43 TW010540NIAID NIH HHS R03 AI132832NIGMS NIH HHS P20 GM103418
6 · The paper itself

Abstract

Viral fusion is a critical step in the entry pathway of enveloped viruses and remains a viable target for antiviral exploration. The current approaches for studying fusion mechanisms include ensemble fusion assays, high-resolution cryo-TEM, and single-molecule fluorescence-based methods. While these methods have provided invaluable insights into the dynamic events underlying fusion processes, they come with their own limitations. These often include extensive data and image analysis in addition to experimental time and technical requirements. This work proposes the use of the spin-spin T2 relaxation technique as a sensitive bioanalytical method for the rapid quantification of interactions between viral fusion proteins and lipids in real time. In this study, new liposome-coated iron oxide nanosensors (LIONs), which mimic as magnetic-labeled host membranes, are reported to detect minute interactions occurring between the membrane and influenza's fusion glycoprotein, hemagglutinin (HA). The influenza fusion protein's interaction with the LION membrane is detected by measuring changes in the sensitive spin-spin T2 magnetic relaxation time using a bench-top NMR instrument. More data is gleaned from including the fluorescent dye DiI into the LION membrane. In addition, the effects of environmental factors on protein-lipid interaction that affect fusion such as pH, time of incubation, trypsin, and cholesterol were also examined. Furthermore, the efficacy and sensitivity of the spin-spin T2 relaxation assay in quantifying similar protein/lipid interactions with more native configurations of HA were demonstrated using virus-like particles (VLPs). Shorter domains derived from HA were used to start a reductionist path to identify the parts of HA responsible for the NMR changes observed. Finally, the known fusion inhibitor Arbidol was employed in our spin-spin T2 relaxation-based fusion assay to demonstrate the application of LIONs in real-time monitoring of this aspect of fusion for evaluation of potential fusion inhibitors.

Indexed as

Influenza, HumanHemagglutinin Glycoproteins, Influenza VirusHumansLiposomesMagnetic PhenomenaHemagglutinin Glycoproteins, Influenza VirusLiposomesinfluenza fusionmagnetic relaxationmagneto-liposomenanosensorpathogen detection

Identifiers

PMID33905237
PMCPMC12950294
OpenAlexW3159485721

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.