Evidence map›Paper›PMID 33903769›Full record

ArticleNature chemical biology2021

Engineering AraC to make it responsive to light instead of arabinose.

Edoardo Romano, Armin Baumschlager, Emir Bora Akmeriç, Navaneethan Palanisamy, Moustafa Houmani, Gregor Schmidt, Mehmet Ali Öztürk, Leonard Ernst, Mustafa Khammash, Barbara Di Ventura

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
11.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 72 citations in OpenAlex.

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  18. Synthetic microbiology in sustainability applications.Nature reviews. Microbiology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Edoardo Romano *Faculty of Biology, Institute of Biology II, University of Freiburg, Freiburg, Germany.
Armin Baumschlager *Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.ORCID http://orcid.org/0000-0002-2546-9038
Emir Bora AkmeriçFaculty of Biology, Institute of Biology II, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0003-4463-8017
Navaneethan PalanisamyFaculty of Biology, Institute of Biology II, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0003-0369-2316
Moustafa HoumaniDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.
Gregor SchmidtDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.
Mehmet Ali ÖztürkFaculty of Biology, Institute of Biology II, University of Freiburg, Freiburg, Germany.
Leonard ErnstBioQuant Center for Quantitative Biology, University of Heidelberg, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-3994-8192
Mustafa KhammashDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland. mustafa.khammash@bsse.ethz.ch.ORCID http://orcid.org/0000-0002-4855-9220
Barbara Di VenturaFaculty of Biology, Institute of Biology II, University of Freiburg, Freiburg, Germany. barbara.diventura@bio.uni-freiburg.de.ORCID http://orcid.org/0000-0002-0247-9989
University of Freiburg · DEETH Zurich · CHHeidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The L-arabinose-responsive AraC and its cognate P

Indexed as

Genetic EngineeringLightArabinoseAraC Transcription FactorEscherichia coliEscherichia coli ProteinsArabinoseAraC protein, E coliAraC Transcription FactorEscherichia coli Proteins

Identifiers

PMID33903769
OpenAlexW3158384274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.