Evidence map›Paper›PMID 33903593›Full record

ArticleNature communications2021

PAX8 and MECOM are interaction partners driving ovarian cancer.

Melusine Bleu, Fanny Mermet-Meillon, Verena Apfel, Louise Barys, Laura Holzer, Marianne Bachmann Salvy, Rui Lopes, Inês Amorim Monteiro Barbosa, Cecile Delmas, Alexandra Hinniger and 29 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 79 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors at 3 institutions in 2 countries.

Melusine Bleu *Disease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Fanny Mermet-Meillon *Disease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Verena Apfel *Disease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Louise Barys *Disease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Laura HolzerDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Marianne Bachmann SalvyDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Rui LopesDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Inês Amorim Monteiro BarbosaDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Cecile DelmasChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Alexandra HinnigerChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Suzanne ChauChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Markus KaufmannChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Simon HaenniChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Karolin BerneiserChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Maria WahleChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Ivana MoravecAnalytical Sciences and Imaging, Novartis Institutes for Biomedical Research, Basel, Switzerland.ORCID 0000-0002-2349-1522
Alexandra VissièresAnalytical Sciences and Imaging, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Tania PoetschAnalytical Sciences and Imaging, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Erik AhrnéAnalytical Sciences and Imaging, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Nathalie CarteAnalytical Sciences and Imaging, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Johannes VosholAnalytical Sciences and Imaging, Novartis Institutes for Biomedical Research, Basel, Switzerland.ORCID 0000-0002-2594-8127
Elisabeth BechterDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Jacques HamonDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Marco MeyerhoferDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Dirk ErdmannDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Matteo FischerDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Therese StachyraDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Felix FreulerChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Sascha GutmannChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.ORCID 0000-0002-4242-8510
César FernándezChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Tobias SchmelzleDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Ulrike NaumannChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.ORCID 0000-0001-7783-7675
Guglielmo RomaChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.ORCID 0000-0002-8020-4219
Kate LawrensonCedars-Sinai Women's Cancer Program at the Samuel Oschin Cancer Center, Los Angeles, CA, USA.ORCID 0000-0002-6469-2515
Cristina Nieto-OberhuberGlobal Discovery Chemistry, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Amanda Cobos-CorreaChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Stephane FerrettiDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland.
Dirk SchübelerFriedrich Miescher Institute for Biomedical Research, University of Basel, Basel, Switzerland.
Giorgio Giacomo GalliDisease area Oncology, Novartis Institutes for Biomedical Research, Basel, Switzerland. giorgio.galli@novartis.com.ORCID 0000-0002-9401-060X
Novartis (Switzerland) · CHCedars-Sinai Medical Center · USUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription factor PAX8 is critical for the development of the thyroid and urogenital system. Comprehensive genomic screens furthermore indicate an additional oncogenic role for PAX8 in renal and ovarian cancers. While a plethora of PAX8-regulated genes in different contexts have been proposed, we still lack a mechanistic understanding of how PAX8 engages molecular complexes to drive disease-relevant oncogenic transcriptional programs. Here we show that protein isoforms originating from the MECOM locus form a complex with PAX8. These include MDS1-EVI1 (also called PRDM3) for which we map its interaction with PAX8 in vitro and in vivo. We show that PAX8 binds a large number of genomic sites and forms transcriptional hubs. At a subset of these, PAX8 together with PRDM3 regulates a specific gene expression module involved in adhesion and extracellular matrix. This gene module correlates with PAX8 and MECOM expression in large scale profiling of cell lines, patient-derived xenografts (PDXs) and clinical cases and stratifies gynecological cancer cases with worse prognosis. PRDM3 is amplified in ovarian cancers and we show that the MECOM locus and PAX8 sustain in vivo tumor growth, further supporting that the identified function of the MECOM locus underlies PAX8-driven oncogenic functions in ovarian cancer.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsCell Line, TumorFemaleHEK293 CellsHumansMDS1 and EVI1 Complex Locus ProteinMiceMice, NudeOvarian NeoplasmsPAX8 Transcription FactorProtein BindingProtein IsoformsTumor BurdenXenograft Model Antitumor AssaysMDS1 and EVI1 Complex Locus ProteinMECOM protein, humanPAX8 protein, humanPAX8 Transcription FactorProtein Isoforms

Identifiers

PMID33903593
PMCPMC8076227
OpenAlexW3157040335

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.