Evidence map›Paper›PMID 33902737›Full record

ArticleEnvironmental microbiome2021

Genome sequence analysis of the beneficial Bacillus subtilis PTA-271 isolated from a Vitis vinifera (cv. Chardonnay) rhizospheric soil: assets for sustainable biocontrol.

Catarina Leal, Florence Fontaine, Aziz Aziz, Conceiçao Egas, Christophe Clément, Patricia Trotel-Aziz

Abstract read
In one paragraph

Article in Environmental microbiome, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. From genome to field:Current research in microbial sciences · 2025
    Article
  2. Article
  3. Article
  4. Exploring the Genomic Landscape ofCurrent issues in molecular biology · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. Complete Genome Sequence Analysis ofInternational journal of molecular sciences · 2022
    Article
  9. Biocontrol of citrus bacterial canker caused bySaudi journal of biological sciences · 2022
    Article
  10. Article
  11. Isolation and Characterization of EndophytePlants (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Cultivar Contributes to the Beneficial Effects ofFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Catarina LealSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP) - EA 4707, BP1039, Cedex 2, F-51687, Reims, France.
Florence FontaineSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP) - EA 4707, BP1039, Cedex 2, F-51687, Reims, France.
Aziz AzizSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP) - EA 4707, BP1039, Cedex 2, F-51687, Reims, France.
Conceiçao EgasUC-Biotech_CNC, Biocant Park, Biotechnology Innovation Center, P-3060-197, Cantanhede, Portugal.
Christophe ClémentSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP) - EA 4707, BP1039, Cedex 2, F-51687, Reims, France.
Patricia Trotel-AzizSFR Condorcet - FR CNRS 3417, University of Reims Champagne-Ardenne, Induced Resistance and Plant Bioprotection (RIBP) - EA 4707, BP1039, Cedex 2, F-51687, Reims, France. patricia.trotel-aziz@univ-reims.fr.ORCID http://orcid.org/0000-0001-8876-3288

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBacillus subtilis strains have been widely studied for their numerous benefits in agriculture, including viticulture. Providing several assets, B. subtilis spp. are described as promising plant-protectors against many pathogens and as influencers to adaptations in a changing environment. This study reports the draft genome sequence of the beneficial Bacillus subtilis PTA-271, isolated from the rhizospheric soil of healthy Vitis vinifera cv. Chardonnay at Champagne Region in France, attempting to draw outlines of its full biocontrol capacity.

resultsThe PTA-271 genome has a size of 4,001,755 bp, with 43.78% of G + C content and 3945 protein coding genes. The draft genome of PTA-271 putatively highlights a functional swarming motility system hypothesizing a colonizing capacity and a strong interacting capacity, strong survival capacities and a set of genes encoding for bioactive substances. Predicted bioactive compounds are known to: stimulate plant growth or defenses such as hormones and elicitors, influence beneficial microbiota, and counteract pathogen aggressiveness such as effectors and many kinds of detoxifying enzymes.

conclusionsPlurality of the putatively encoded biomolecules by Bacillus subtilis PTA-271 genome suggests environmentally robust biocontrol potential of PTA-271, protecting plants against a broad spectrum of pathogens.

Indexed as

Bacillus subtilis PTA-271Beneficial bacteriumGenome draftGrapevine trunk diseasesGrey moldSustainable biocontrolWide protective spectrum

Identifiers

PMID33902737
PMCPMC8067347

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.