Evidence map›Paper›PMID 33902726›Full record

SynthesisActa neuropathologica communications2021

Sex-specific DNA methylation differences in Alzheimer's disease pathology.

Lanyu Zhang, Juan I Young, Lissette Gomez, Tiago C Silva, Michael A Schmidt, Jesse Cai, Xi Chen, Eden R Martin, Lily Wang

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Acta neuropathologica communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Blood DNA Methylation Predicts Long-Term Risk of Dementia in Prospective Cohorts.medRxiv : the preprint server for health sciences · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
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  12. A comprehensive guide to genomeZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2025
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Blood DNA methylation signature for incident dementia: Evidence from longitudinal cohorts.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lanyu ZhangDivision of Biostatistics, Department of Public Health Sciences, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Juan I YoungDr. John T Macdonald Foundation Department of Human Genetics, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Lissette GomezJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Tiago C SilvaDivision of Biostatistics, Department of Public Health Sciences, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Michael A SchmidtDr. John T Macdonald Foundation Department of Human Genetics, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Jesse CaiBrentwood High School, 5304 Murray Ln, Brentwood, TN, 37027, USA.
Xi ChenDivision of Biostatistics, Department of Public Health Sciences, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Eden R MartinDr. John T Macdonald Foundation Department of Human Genetics, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA.
Lily WangDivision of Biostatistics, Department of Public Health Sciences, University of Miami, Miller School of Medicine, Miami, FL, 33136, USA. lily.wangg@gmail.com.ORCID 0000-0002-8311-4251
University of Miami · USBrentwood Hospital · US

Funding

Yale Study Support Suite (YES3): Dashboard and Web Portal Software Supporting Research Workflow through integrated, customizable REDCap External ModulesP30AG021342 · NIA · YALE UNIVERSITY · PI Denise Esserman · 2002 to 2026
$37.9M
Yale Training Program in Geriatric Clinical Epidemiology and Aging-Related ResearchT32AG019134 · NIA · YALE UNIVERSITY · PI Terri R. Fried · 2001 to 2026
$7.5M
Integrative Genomic Approaches for Understanding Sex Differences in Alzheimer's DiseaseR01AG062634 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI KUNKLE, BRIAN WILLIAM, MARTIN, EDEN R. · 2019 to 2023
$3.8M
Genetic Basis of Age-at-Onset of Alzheimer DiseaseRF1AG060472 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI GAO, XIAOYI RAYMOND, LI, YI-JU · 2018 to 2018
$3.6M
Building blood based DNA methylation signatures for AD that are reflective of CNS changesRF1AG061127 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI WANG, LILY · 2019 to 2019
$1.9M
New statistical strategies for comprehensive analysis of epigenomewide methylation dataR21AG060459 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI WANG, LILY · 2018 to 2019
$422k
NIA NIH HHS 1R01AG060472NIA NIH HHS P30 AG021342NIA NIH HHS R01AG061127NIA NIH HHS R01 AG062634NIA NIH HHS R01AG062634NIA NIH HHS R21 AG060459NIA NIH HHS R21AG060459NIA NIH HHS RF1 AG060472NIA NIH HHS RF1 AG061127NIA NIH HHS T32 AG019134
6 · The paper itself

Abstract

Sex is an important factor that contributes to the clinical and biological heterogeneities in Alzheimer's disease (AD), but the regulatory mechanisms underlying sex disparity in AD are still not well understood. DNA methylation is an important epigenetic modification that regulates gene transcription and is known to be involved in AD. We performed the first large-scale sex-specific meta-analysis of DNA methylation differences in AD neuropathology, by re-analyzing four recent epigenome-wide association studies totaling more than 1000 postmortem prefrontal cortex brain samples using a uniform analytical pipeline. For each cohort, we employed two complementary analytical strategies, a sex-stratified analysis that examined methylation-Braak stage associations in male and female samples separately, and a sex-by-Braak stage interaction analysis that compared the magnitude of these associations between different sexes. Our analysis uncovered 14 novel CpGs, mapped to genes such as TMEM39A and TNXB that are associated with the AD Braak stage in a sex-specific manner. TMEM39A is known to be involved in inflammation, dysregulated type I interferon responses, and other immune processes. TNXB encodes tenascin proteins, which are extracellular matrix glycoproteins demonstrated to modulate synaptic plasticity in the brain. Moreover, for many previously implicated genes in AD neuropathology, such as MBP and AZU1, our analysis provided the new insights that they were predominately driven by effects in only one sex. These sex-specific DNA methylation differences were enriched in divergent biological processes such as integrin activation in females and complement activation in males. Our study implicated multiple new loci and biological processes that affected AD neuropathology in a sex-specific manner.

Indexed as

Databases, GeneticSex CharacteristicsAgedAged, 80 and overAlzheimer DiseaseCohort StudiesDNA MethylationFemaleHumansMalePrefrontal CortexAlzheimer’s diseaseDNA methylationEpigenome-wide association studySex-specific

Identifiers

PMID33902726
PMCPMC8074512
OpenAlexW3158546972

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.