Evidence map›Paper›PMID 33900172›Full record

ArticleEmerging infectious diseases2021

Epidemiologic History and Genetic Diversity Origins of Chikungunya and Dengue Viruses, Paraguay.

Tiago Gräf, Cynthia Vazquez, Marta Giovanetti, Fernanda de Bruycker-Nogueira, Vagner Fonseca, Ingra Morales Claro, Jaqueline Goes de Jesus, Andrea Gómez, Joilson Xavier, Marcos Cesar Lima de Mendonça and 13 more

Abstract read
In one paragraph

Article in Emerging infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Notes from the Field: Chikungunya Outbreak - Paraguay, 2022-2023.MMWR. Morbidity and mortality weekly report · 2023
    Article
  9. Article
  10. Rapid epidemic expansion of chikungunya virus-ECSA lineage in Paraguay.medRxiv : the preprint server for health sciences · 2023
    Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Tiago Gräf
Cynthia Vazquez
Marta Giovanetti
Fernanda de Bruycker-Nogueira
Vagner Fonseca
Ingra Morales Claro
Jaqueline Goes de Jesus
Andrea Gómez
Joilson Xavier
Marcos Cesar Lima de Mendonça
Shirley Villalba
Juan Torales
Maria Liz Gamarra
Julien Thézé
Ana Maria Bispo de Filippis
Vasco Azevedo
Tulio de Oliveira
Leticia Franco
Carlos F Campelo de Albuquerque
Sandra Irala
Edward Charles Holmes
Jairo Andrés Méndez Rico
Luiz Carlos Junior Alcantara

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Paraguay has been severely affected by emergent Zika and chikungunya viruses, and dengue virus is endemic. To learn more about the origins of genetic diversity and epidemiologic history of these viruses in Paraguay, we deployed portable sequencing technologies to strengthen genomic surveillance and determine the evolutionary and epidemic history of arthropod-borne viruses (arboviruses). Samples stored at the Paraguay National Central Laboratory were sequenced and subjected to phylogenetic analysis. Among 33 virus genomes generated, we identified 2 genotypes of chikungunya and 2 serotypes of dengue virus that circulated in Paraguay during 2014-2018; the main source of these virus lineages was estimated to be Brazil. The evolutionary history inferred by our analyses precisely matched the available travel history of the patients. The genomic surveillance approach used was valuable for describing the epidemiologic history of arboviruses and can be used to determine the origins and evolution of future arbovirus outbreaks.

Indexed as

ArbovirusesChikungunya FeverDengueDengue VirusZika VirusZika Virus InfectionBrazilGenetic VariationHumansParaguayPhylogenyarboviruseschikungunya virusdengue virusgenomic surveillancenanopore sequencingParaguayvector-borne infectionsviruses

Identifiers

PMID33900172
PMCPMC8084490

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.