Evidence map›Paper›PMID 33896203›Full record

ArticlePhilosophical transactions. Series A, Mathematical, physical, and engineering sciences2021

Improving axial resolution in Structured Illumination Microscopy using deep learning.

Miguel A Boland, Edward A K Cohen, Seth R Flaxman, Mark A A Neil

Abstract readEvaluation Study
In one paragraph

Article in Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Imaging nanoscale axial dynamics at the basal plasma membrane.The international journal of biochemistry & cell biology · 2023
    Review
  3. Super-resolution microscopy: a brief history and new avenues.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2022
    Article
  4. Article
  5. Review
  6. Super-resolution structured illumination microscopy: past, present and future.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Miguel A BolandDepartment of Mathematics, Imperial College, South Kensington Campus, 180 Queen's Gate, London SW7 2RH, UK.
Edward A K CohenDepartment of Mathematics, Imperial College, South Kensington Campus, 180 Queen's Gate, London SW7 2RH, UK.
Seth R FlaxmanDepartment of Mathematics, Imperial College, South Kensington Campus, 180 Queen's Gate, London SW7 2RH, UK.
Mark A A NeilDepartment of Mathematics, Imperial College, South Kensington Campus, 180 Queen's Gate, London SW7 2RH, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Structured Illumination Microscopy (SIM) is a widespread methodology to image live and fixed biological structures smaller than the diffraction limits of conventional optical microscopy. Using recent advances in image up-scaling through deep learning models, we demonstrate a method to reconstruct 3D SIM image stacks with twice the axial resolution attainable through conventional SIM reconstructions. We further demonstrate our method is robust to noise and evaluate it against two-point cases and axial gratings. Finally, we discuss potential adaptions of the method to further improve resolution. This article is part of the Theo Murphy meeting issue 'Super-resolution structured illumination microscopy (part 1)'.

Indexed as

Deep LearningAnimalsChromatinComputer SimulationHumansImage Processing, Computer-AssistedImaging, Three-DimensionalMicroscopy, ConfocalMicroscopy, FluorescenceOptical PhenomenaChromatindeep learningmicroscopyresidual channel attention networkStructured Illumination Microscopystructure illumination

Identifiers

PMID33896203
PMCPMC8072200

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.