Evidence map›Paper›PMID 33893274›Full record

ArticleNature communications2021

CRISPR-based genome editing in primary human pancreatic islet cells.

Romina J Bevacqua, Xiaoqing Dai, Jonathan Y Lam, Xueying Gu, Mollie S H Friedlander, Krissie Tellez, Irene Miguel-Escalada, Silvia Bonàs-Guarch, Goutham Atla, Weichen Zhao and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. eVLP-Mediated Cas9 Delivery for Preventing IBMIR in Islet Transplantation.Small (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  5. International journal of biological sciences · 2026
    Review
  6. The Role of Gene Therapy and RNA-Based Therapeutic Strategies in Diabetes.International journal of molecular sciences · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Strategies for optimization of hypoglycemia rat models.Animal models and experimental medicine · 2025
    Review
  11. MicroRNAs in diabetes mellitus.Journal of diabetes and metabolic disorders · 2025
    Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 4 countries.

Romina J BevacquaDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Xiaoqing DaiAlberta Diabetes Institute and Department of Pharmacology, University of Alberta, Edmonton, AB, Canada.
Jonathan Y LamDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-9579-0604
Xueying GuDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Mollie S H FriedlanderDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Krissie TellezDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Irene Miguel-EscaladaBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.ORCID http://orcid.org/0000-0003-3461-6404
Silvia Bonàs-GuarchBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.ORCID http://orcid.org/0000-0002-2085-7488
Goutham AtlaBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Weichen ZhaoDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Seung Hyun KimDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA.
Antonia A DominguezDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Lei S QiDepartment of Bioengineering, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-3965-3223
Jorge FerrerBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.ORCID http://orcid.org/0000-0002-5959-5729
Patrick E MacDonaldAlberta Diabetes Institute and Department of Pharmacology, University of Alberta, Edmonton, AB, Canada.
Seung K KimDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, USA. seungkim@stanford.edu.ORCID http://orcid.org/0000-0001-6135-7810
Stanford University · USCentro de Investigación Biomédica en Red Diabetes y Enfermedades Metabólicas Asociadas · ESUniversity of Alberta · CANorthern California Research · USStanford Medicine · US

Funding

Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI OWEN P MCGUINNESS · 2012 to 2026
$29.3M
The Human Islet Distribution Coordinating Center (UC4)UC4DK098085 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI EVANS-MOLINA, CARMELLA, NILAND, JOYCE CAROL · 2012 to 2017
$25.6M
Stanford Islet Research CoreP30DK116074 · NIDDK · STANFORD UNIVERSITY · PI Seung K Kim · 2017 to 2026
$19.5M
Therapeutic targeting of human islets with recombinant regulatory T cellsU01DK123743 · NIDDK · STANFORD UNIVERSITY · PI KIM, SEUNG K, MEYER, EVERETT · 2019 to 2022
$2.9M
Genetic and physiologic regulation of pig islet development and functionR01DK128932 · NIDDK · STANFORD UNIVERSITY · PI BERGER, TRISH, KIM, SEUNG K · 2021 to 2024
$2.6M
In vivo systems to discover mechanisms regulating human islet alpha cell functionR01DK126482 · NIDDK · STANFORD UNIVERSITY · PI KIM, SEUNG K, MACDONALD, PATRICK · 2020 to 2023
$2.2M
Regulation of gastrointestinal hormone signaling and metabolism by Neuromedin UR01DK107507 · NIDDK · STANFORD UNIVERSITY · PI KIM, SEUNG K · 2017 to 2021
$2.0M
Discovering genetic and hormonal mechanisms underlying diabetes risk from flies to humansR01DK108817 · NIDDK · STANFORD UNIVERSITY · PI KIM, SEUNG K · 2018 to 2022
$2.0M
Medical Research Council MR/L02036X/1NIDDK NIH HHS P30 DK020593NIDDK NIH HHS P30 DK116074NIDDK NIH HHS R01 DK107507NIDDK NIH HHS R01 DK108817NIDDK NIH HHS R01 DK126482NIDDK NIH HHS R01 DK128932NIDDK NIH HHS U01 DK123743NIDDK NIH HHS UC4 DK098085Wellcome TrustWellcome Trust WT101033
6 · The paper itself

Abstract

Gene targeting studies in primary human islets could advance our understanding of mechanisms driving diabetes pathogenesis. Here, we demonstrate successful genome editing in primary human islets using clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9 (Cas9). CRISPR-based targeting efficiently mutated protein-coding exons, resulting in acute loss of islet β-cell regulators, like the transcription factor PDX1 and the K

Indexed as

CRISPR-Cas SystemsModels, GeneticBase SequenceDiabetes Mellitus, Type 2Gene EditingGene Expression RegulationHomeodomain ProteinsHumansInsulin-Secreting CellsIslets of LangerhansKcnj11 ChannelPotassium Channels, Inwardly RectifyingTrans-ActivatorsHomeodomain ProteinsKcnj11 Channelpancreatic and duodenal homeobox 1 proteinPotassium Channels, Inwardly RectifyingTrans-Activators

Identifiers

PMID33893274
PMCPMC8065166
OpenAlexW3153594903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.