Evidence map›Paper›PMID 33890866›Full record

ArticleJMIR medical informatics2021

Automatable Distributed Regression Analysis of Vertically Partitioned Data Facilitated by PopMedNet: Feasibility and Enhancement Study.

Qoua Her, Thomas Kent, Yuji Samizo, Aleksandra Slavkovic, Yury Vilk, Sengwee Toh

Abstract read
In one paragraph

Article in JMIR medical informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Qoua HerDepartment of Population Medicine, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0002-6427-1032
Thomas KentDepartment of Statistics, Pennsylvania State University, University Park, PA, United States.ORCID https://orcid.org/0000-0003-1247-9373
Yuji SamizoDepartment of Statistics, Pennsylvania State University, University Park, PA, United States.ORCID https://orcid.org/0000-0001-8219-562X
Aleksandra SlavkovicDepartment of Statistics, Pennsylvania State University, University Park, PA, United States.ORCID https://orcid.org/0000-0003-0497-1771
Yury VilkDepartment of Population Medicine, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0002-0192-2045
Sengwee TohDepartment of Population Medicine, Harvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0002-5160-0810

Funding

Penn State Clinical and Translational Science InstituteUL1TR002014 · NCATS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI KRASCHNEWSKI, JENNIFER L. · 2016 to 2025
$33.7M
Privacy-protecting distributed analysis of biomedical big dataU01EB023683 · NIBIB · HARVARD PILGRIM HEALTH CARE, INC. · PI TOH, DARREN · 2016 to 2018
$1.4M
NCATS NIH HHS UL1 TR002014NIBIB NIH HHS U01 EB023683
6 · The paper itself

Abstract

backgroundIn clinical research, important variables may be collected from multiple data sources. Physical pooling of patient-level data from multiple sources often raises several challenges, including proper protection of patient privacy and proprietary interests. We previously developed an SAS-based package to perform distributed regression-a suite of privacy-protecting methods that perform multivariable-adjusted regression analysis using only summary-level information-with horizontally partitioned data, a setting where distinct cohorts of patients are available from different data sources. We integrated the package with PopMedNet, an open-source file transfer software, to facilitate secure file transfer between the analysis center and the data-contributing sites. The feasibility of using PopMedNet to facilitate distributed regression analysis (DRA) with vertically partitioned data, a setting where the data attributes from a cohort of patients are available from different data sources, was unknown.

objectiveThe objective of the study was to describe the feasibility of using PopMedNet and enhancements to PopMedNet to facilitate automatable vertical DRA (vDRA) in real-world settings.

methodsWe gathered the statistical and informatic requirements of using PopMedNet to facilitate automatable vDRA. We enhanced PopMedNet based on these requirements to improve its technical capability to support vDRA.

resultsPopMedNet can enable automatable vDRA. We identified and implemented two enhancements to PopMedNet that improved its technical capability to perform automatable vDRA in real-world settings. The first was the ability to simultaneously upload and download multiple files, and the second was the ability to directly transfer summary-level information between the data-contributing sites without a third-party analysis center.

conclusionsPopMedNet can be used to facilitate automatable vDRA to protect patient privacy and support clinical research in real-world settings.

Indexed as

datadata networksdistributed data networksdistributed regression analysisinformaticsprivacy-protecting analyticsvertically partitioned data

Identifiers

PMID33890866
PMCPMC8105763

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.