Evidence map›Paper›PMID 33890183›Full record

ArticleTropical animal health and production2021

Comparison of genetic parameters and estimated breeding values for worm resistance in meat sheep obtained using traditional and genomic models.

Gleyson Vieira Dos Santos, Natanael Pereira da Silva Santos, Luiz Antonio Silva Figueiredo Filho, Fábio Barros Britto, Luciano Silva Sena, Tatiana Saraiva Torres, Paulo Luiz Souza Carneiro, José Lindenberg Rocha Sarmento

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In one paragraph

Article in Tropical animal health and production, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Caprine and Ovine Genomic Selection-Progress and Application.Animals : an open access journal from MDPI · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Gleyson Vieira Dos SantosDepartment of Animal Science, Federal University of Piauí (UFPI), Campus Professora Cinobelina Elvas, BR 135, Km 3, Bom Jesus, PI, 64900-000, Brazil. gleyson.vieira@yahoo.com.ORCID http://orcid.org/0000-0003-3351-0632
Natanael Pereira da Silva SantosDepartment of Agronomy, UFPI, Campus Professora Cinobelina Elvas, BR 135, Km 3, Bom Jesus, PI, 64900-000, Brazil.
Luiz Antonio Silva Figueiredo FilhoFederal Institute of Education, Science and Technology of Maranhão (IFMA), MA 340, Km 2, Caxias, MA, 65609-899, Brazil.
Fábio Barros BrittoDepartment of Biology, UFPI, Campus Universitário Ministro Petrônio Portella, Teresina, PI, 64049-550, Brazil.
Luciano Silva SenaAgrarian Sciences Center (CCA), UFPI, Campus Universitário Ministro Petrônio Portella, Teresina, PI, 64049-550, Brazil.
Tatiana Saraiva TorresAgrarian Sciences Center (CCA), UFPI, Campus Universitário Ministro Petrônio Portella, Teresina, PI, 64049-550, Brazil.
Paulo Luiz Souza CarneiroState University of Southwestern Bahia (UESB), Jequié, BA, 45208-091, Brazil.
José Lindenberg Rocha SarmentoDepartment of Animal Science, (CCA), UFPI, Campus Universitário Ministro Petrônio Portella, Teresina, PI, 64049-550, Brazil.
Universidade Federal do Piauí · BRInstituto Federal do Maranhão · BRSouthwest Bahia State University · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 481031/2012-0Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 001Universidade Federal do Piauí 2013NE801717
6 · The paper itself

Abstract

Gastrointestinal nematode infections have caused expressive losses in sheep production worldwide. The improvement of host genetic resistance to worms has been used as a strategy to mitigate this problem. In this sense, the inclusion of genomic information has shown potential to increase the accuracy of prediction of breeding values and speed up selection. In this study, we aimed to compare estimates of genetic parameters and breeding values for traits that indicate the resistance to gastrointestinal nematode infection in Santa Inês sheep using the pedigree-based BLUP or including genomic information. There were 1478 animals in the pedigree, of which 271 were genotyped using the OvineSNP50 BeadChip (Illumina, Inc.). The host resistance was assessed using the following traits: fecal nematode egg counts (FEC); FAMACHA score (FAMACHA); and resistance to gastrointestinal nematode infection (RGNI) as a combination of FEC, FAMACHA, body condition score, and hematocrit. The genetic parameters and breeding values were estimated using single- and multi-trait analyses. For RGNI, the heritability estimates ranged from 0.25 using the single-trait genomic model (S-H) to 0.54 using the traditional multi-trait model (M-A). The heritability estimates for FEC ranged from 0.06 to 0.36, using the single-trait pedigree-based model (S-A) and the multi-trait genomic model (M-H), respectively. For FAMACHA, the heritability estimates ranged from 0.46 (M-H) to 0.54 (M-A). Estimates of genetic correlation ranged from 0.22 to 0.69. The inclusion of genomic information provided gain in accuracy for all traits. All estimates of predictive ability obtained using genomic data in a multi-trait setting were higher than those obtained using single-trait models. The estimates of predictive ability ranged from 0.03 (S-A) to 0.46 (M-H). The heritability estimates obtained using genomic information showed that all traits evaluated are suitable for genomic selection. Despite the low accuracies obtained, the use of the genomic model provided more accurate estimates of breeding values in comparison to the pedigree-based model.

Indexed as

GenomeGenomicsAnimalsGenotypeMeatModels, GeneticPedigreePhenotypeSheepSheep, DomesticAccuracyGenetic correlationHeritabilityk-meansSNPVerminosis

Identifiers

PMID33890183
OpenAlexW3154214421

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.