Evidence map›Paper›PMID 33889166›Full record

ArticleFrontiers in plant science2021

Integrative Modeling of Gene Expression and Metabolic Networks of

Mathieu Cloutier, Daoquan Xiang, Peng Gao, Leon V Kochian, Jitao Zou, Raju Datla, Edwin Wang

Abstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mathieu CloutierLaboratory of Bioinformatics and Systems Biology, National Research Council Canada, Montreal, QC, Canada.
Daoquan XiangAquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada.
Peng GaoGlobal Institute for Food Security, University of Saskatchewan, Saskatoon, SK, Canada.
Leon V KochianGlobal Institute for Food Security, University of Saskatchewan, Saskatoon, SK, Canada.
Jitao ZouAquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada.
Raju DatlaAquatic and Crop Resource Development, National Research Council Canada, Saskatoon, SK, Canada.
Edwin WangLaboratory of Bioinformatics and Systems Biology, National Research Council Canada, Montreal, QC, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fatty acids in crop seeds are a major source for both vegetable oils and industrial applications. Genetic improvement of fatty acid composition and oil content is critical to meet the current and future demands of plant-based renewable seed oils. Addressing this challenge can be approached by network modeling to capture key contributors of seed metabolism and to identify underpinning genetic targets for engineering the traits associated with seed oil composition and content. Here, we present a dynamic model, using an Ordinary Differential Equations model and integrated time-course gene expression data, to describe metabolic networks during

Indexed as

dynamic modelingfatty acidsgene expressionmetabolic networksplant embryo

Identifiers

PMID33889166
PMCPMC8056077

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.