ArticleBMC genomics2021
Chloroplast phylogenomic insights into the evolution of Distylium (Hamamelidaceae).
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed.
- Niche evolution and asymmetric diversification in elm species (Ulmaceae).Plant diversity · 2026Article
- Chloroplast Genome Insights ofEcology and evolution · 2026Article
- Pan-Plastome Evolution and Metabolite Variation Provide Insights to Conservation of the Tibetan Medicinal PlantPlants (Basel, Switzerland) · 2026Article
- Comparative chloroplast genomes of Hamamelidaceae: genome evolution and phylogenomic implications.BMC plant biology · 2026Article
- Plastid genome evolution and phylogenomics with broad taxon sampling: insights into intrafamilial classification of Hamamelidaceae.Frontiers in plant science · 2026Article
- Comparative analysis of chloroplast genomes of Loropetalum chinense and its purplish-red-flowered variety.Functional & integrative genomics · 2025Article
- Chloroplast Genome Evolution of Hamamelidaceae at Subfamily Level.Ecology and evolution · 2025Article
- Assembly-free reads accurate identification (AFRAID) approach outperforms other methods of DNA barcoding in the walnut family (Juglandaceae).Plant diversity · 2025Article
- Article
- Exploring the Evolutionary History and Phylogenetic Relationships of Giant Reed (International journal of molecular sciences · 2024Article
- The size diversity of the Pteridaceae family chloroplast genome is caused by overlong intergenic spacers.BMC genomics · 2024Article
- Comparative plastomes sheds light on phylogeny ofFrontiers in plant science · 2024Article
- The complete chloroplast genomes and phylogenetic analysis ofMitochondrial DNA. Part B, Resources · 2024Article
- Maternal Donor and Genetic Variation ofInternational journal of molecular sciences · 2023Article
- Insights into the phylogeny and chloroplast genome evolution of Eriocaulon (Eriocaulaceae).BMC plant biology · 2023Article
- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2023Article
- Plastid Phylogenomics Provide Evidence to Accept Two New Members ofInternational journal of molecular sciences · 2022Article
- Characterization of the Dicranostigma leptopodum chloroplast genome and comparative analysis within subfamily Papaveroideae.BMC genomics · 2022Article
- Application of chloroplast genome in the identification of Traditional Chinese Medicine Viola philippica.BMC genomics · 2022Article
- Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family.BMC biology · 2022Article
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Authors and funding
8 authors.
Funding
Abstract
backgroundMost Distylium species are endangered. Distylium species mostly display homoplasy in their flowers and fruits, and are classified primarily based on leaf morphology. However, leaf size, shape, and serration vary tremendously making it difficult to use those characters to identify most species and a significant challenge to address the taxonomy of Distylium. To infer robust relationships and develop variable markers to identify Distylium species, we sequenced most of the Distylium species chloroplast genomes.
resultsThe Distylium chloroplast genome size was 159,041-159,127 bp and encoded 80 protein-coding, 30 transfer RNAs, and 4 ribosomal RNA genes. There was a conserved gene order and a typical quadripartite structure. Phylogenomic analysis based on whole chloroplast genome sequences yielded a highly resolved phylogenetic tree and formed a monophyletic group containing four Distylium clades. A dating analysis suggested that Distylium originated in the Oligocene (34.39 Ma) and diversified within approximately 1 Ma. The evidence shows that Distylium is a rapidly radiating group. Four highly variable markers, matK-trnK, ndhC-trnV, ycf1, and trnT-trnL, and 74 polymorphic simple sequence repeats were discovered in the Distylium plastomes.
conclusionsThe plastome sequences had sufficient polymorphic information to resolve phylogenetic relationships and identify Distylium species accurately.
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