Evidence map›Paper›PMID 33886612›Full record

ArticlePloS one2021

Sparse Poisson regression via mixed-integer optimization.

Hiroki Saishu, Kota Kudo, Yuichi Takano

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hiroki SaishuGraduate School of Science and Technology, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Kota KudoGraduate School of Science and Technology, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Yuichi TakanoFaculty of Engineering, Information and Systems, University of Tsukuba, Tsukuba, Ibaraki, Japan.ORCID 0000-0002-8919-1282

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a mixed-integer optimization (MIO) approach to sparse Poisson regression. The MIO approach to sparse linear regression was first proposed in the 1970s, but has recently received renewed attention due to advances in optimization algorithms and computer hardware. In contrast to many sparse estimation algorithms, the MIO approach has the advantage of finding the best subset of explanatory variables with respect to various criterion functions. In this paper, we focus on a sparse Poisson regression that maximizes the weighted sum of the log-likelihood function and the L2-regularization term. For this problem, we derive a mixed-integer quadratic optimization (MIQO) formulation by applying a piecewise-linear approximation to the log-likelihood function. Optimization software can solve this MIQO problem to optimality. Moreover, we propose two methods for selecting a limited number of tangent lines effective for piecewise-linear approximations. We assess the efficacy of our method through computational experiments using synthetic and real-world datasets. Our methods provide better log-likelihood values than do conventional greedy algorithms in selecting tangent lines. In addition, our MIQO formulation delivers better out-of-sample prediction performance than do forward stepwise selection and L1-regularized estimation, especially in low-noise situations.

Indexed as

Linear ModelsPoisson DistributionAlgorithmsLikelihood FunctionsSoftware

Identifiers

PMID33886612
PMCPMC8062005

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.