Evidence map›Paper›PMID 33886541›Full record

ArticlePLoS genetics2021

Toxic Y chromosome: Increased repeat expression and age-associated heterochromatin loss in male Drosophila with a young Y chromosome.

Alison H Nguyen, Doris Bachtrog

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Sex differences in DNA methylation in bats.Annals of the New York Academy of Sciences · 2025
    Article
  7. Article
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  15. Article
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  17. Sex-biased gene expression in nutrient-sensing pathways.Proceedings. Biological sciences · 2023
    Article
  18. Article
  19. Article
  20. Repeated translocation of a supergene underlying rapid sex chromosome turnover inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Alison H NguyenDepartment of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0002-3269-9763
Doris BachtrogDepartment of Integrative Biology, University of California Berkeley, Berkeley, California, United States of America.ORCID 0000-0001-9724-9467
University of California, Berkeley · US

Funding

The formation of Heterochromatin on evolving Y chromosomesR01GM101255 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Doris Bachtrog · 2015 to 2026
$4.9M
The evolution of dosage compensation in DrosophilaR01GM076007 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BACHTROG, DORIS · 2006 to 2020
$3.6M
Aging and the evolution of the sex-specific chromatin structure in DrosophilaR56AG057029 · NIA · UNIVERSITY OF CALIFORNIA BERKELEY · PI BACHTROG, DORIS · 2017 to 2017
$683k
NIA NIH HHS R56 AG057029NIGMS NIH HHS R01 GM076007NIGMS NIH HHS R01 GM101255
6 · The paper itself

Abstract

Sex-specific differences in lifespan are prevalent across the tree of life and influenced by heteromorphic sex chromosomes. In species with XY sex chromosomes, females often outlive males. Males and females can differ in their overall repeat content due to the repetitive Y chromosome, and repeats on the Y might lower survival of the heterogametic sex (toxic Y effect). Here, we take advantage of the well-assembled young Y chromosome of Drosophila miranda to study the sex-specific dynamics of chromatin structure and repeat expression during aging in male and female flies. Male D. miranda have about twice as much repetitive DNA compared to females, and live shorter than females. Heterochromatin is crucial for silencing of repetitive elements, yet old D. miranda flies lose H3K9me3 modifications in their pericentromere, with heterochromatin loss being more severe during aging in males than females. Satellite DNA becomes de-repressed more rapidly in old vs. young male flies relative to females. In contrast to what is observed in D. melanogaster, we find that transposable elements (TEs) are expressed at higher levels in male D. miranda throughout their life. We show that epigenetic silencing via heterochromatin formation is ineffective on the TE-rich neo-Y chromosome, presumably due to active transcription of a large number of neo-Y linked genes, resulting in up-regulation of Y-linked TEs already in young males. This is consistent with an interaction between the evolutionary age of the Y chromosome and the genomic effects of aging. Our data support growing evidence that "toxic Y chromosomes" can diminish male fitness and a reduction in heterochromatin can contribute to sex-specific aging.

Indexed as

AnimalsBiological EvolutionDNA Transposable ElementsDrosophila melanogasterEpigenesis, GeneticFemaleHeterochromatinMaleRepetitive Sequences, Nucleic AcidSex ChromosomesY ChromosomeDNA Transposable ElementsHeterochromatin

Identifiers

PMID33886541
PMCPMC8061872
OpenAlexW3153877471

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.