Evidence map›Paper›PMID 33886057›Full record

ArticleMolecular biology reports2021

Association of cell free mitochondrial DNA and caspase-1 expression with disease severity and ARTs efficacy in HIV infection.

Zain Ali, Shahid Waseem, Iram Shahzadi, Sidra Bukhari, Riffat Aysha Anis, Ibrar Ahmed, Mariam Anees

Abstract read
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Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zain AliDepartment of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, University Road, Islamabad, 45320, Pakistan.
Shahid WaseemAlpha Genomics (Pvt) Ltd., Islamabad, Pakistan.
Iram ShahzadiDepartment of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, University Road, Islamabad, 45320, Pakistan.
Sidra BukhariDepartment of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, University Road, Islamabad, 45320, Pakistan.
Riffat Aysha AnisInstitute of Diet and Nutritional Sciences, University of Lahore, Islamabad Campus, Islamabad, Pakistan.
Ibrar AhmedAlpha Genomics (Pvt) Ltd., Islamabad, Pakistan.
Mariam AneesDepartment of Biochemistry, Faculty of Biological Sciences, Quaid-i-Azam University, University Road, Islamabad, 45320, Pakistan. mariam@qau.edu.pk.ORCID http://orcid.org/0000-0001-9049-4718
Quaid-i-Azam University · PKUniversity of Lahore · PK

Funding

Higher Education Commision, Pakistan NRPU 4481
6 · The paper itself

Abstract

HIV infection is a global health concern. Current HIV-diagnostics provide information about the disease progression and efficacy of anti-retroviral therapies (ARVs), but this information is very limited and sometimes imprecise. Present study assessed the potential role of mononuclear cell (MNC) death, expression of caspases (1&3) and cell free mitochondrial DNA (CF mt-DNA) in HIV infected individuals. Apoptosis, cell-count, expression of caspases and CF mt-DNA were measured through flow cytometry and qPCR, respectively, in HIV infected individuals (n = 120) divided in two groups i.e. ARVs-receiving (treated, n = 87), ART-naïve (untreated, n = 37) and healthy individuals (n = 47). Data showed significant (p < 0.0001) cell death in untreated individuals than treated and healthy individuals. CD4-positive T-cell percentage declined (p < 0.0001) in untreated as compared to treated individuals. Caspase-1, an indicator of pyroptosis, and CF mt-DNA were also elevated in untreated HIV infected individuals. Untreated individuals when administered with ARVs showed improved CD4-positive T-cell percentage, lower caspase-1, CF mt-DNA and cell death. Data elucidated positive co-relation between cell death and CF mt-DNA in treated and untreated HIV infected individuals. While CD4-positive T-cell percentage was negatively correlated with caspase-1 expression and CF mt-DNA. Elevated levels of CF mt-DNA and caspase-1 in HIV infected individuals, positive correlation between cell death and CF mt-DNA, negative correlation of CD4-positive T-cell percentage with CF mt-DNA and caspase-1 expression clearly indicated the potential of CF mt-DNA and caspase-1 as a novel disease progression and ARTs effectiveness biomarkers in HIV.

Indexed as

AdultAntiviral AgentsApoptosisCaspase 1Cell-Free Nucleic AcidsDNA, MitochondrialFemaleGene Expression RegulationHIV InfectionsHumansMaleMiddle AgedSeverity of Illness IndexTreatment OutcomeYoung AdultAntiviral AgentsCaspase 1Cell-Free Nucleic AcidsDNA, MitochondrialAnti-retroviral therapyCaspase-1Caspase-3Cell free mitochondrial DNAHIVMononuclear cells

Identifiers

PMID33886057
OpenAlexW3155999531

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.