Evidence map›Paper›PMID 33885820›Full record

ArticleMolecular biology and evolution2021

Asexuality Associated with Marked Genomic Expansion of Tandemly Repeated rRNA and Histone Genes.

Kyle E McElroy, Stefan Müller, Dunja K Lamatsch, Laura Bankers, Peter D Fields, Joseph R Jalinsky, Joel Sharbrough, Jeffrey L Boore, John M Logsdon, Maurine Neiman

Abstract read
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  10. Parthenogenesis in dipterans: a genetic perspective.Proceedings. Biological sciences · 2023
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kyle E McElroyEcology, Evolutionary, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0001-9581-2535
Stefan MüllerInstitute of Human Genetics, Munich University Hospital, Ludwig-Maximilians University, Munich, Germany.
Dunja K LamatschResearch Department for Limnology, University of Innsbruck, Mondsee, Mondsee, Austria.
Laura BankersDivision of Infectious Diseases, University of Colorado-Anschutz Medical Campus, Aurora, CO, USA.
Peter D FieldsDepartment of Environmental Sciences, Zoology, University of Basel, Basel, Switzerland.ORCID 0000-0003-2959-2524
Joseph R JalinskyDepartment of Biology, University of Iowa, Iowa City, IA, USA.
Joel SharbroughBiology Department, New Mexico Institute of Mining and Technology, Socorro, NM, USA.
Jeffrey L BooreProvidence St. Joseph Health and Institute for Systems Biology, Seattle, WA, USA.
John M LogsdonDepartment of Biology, University of Iowa, Iowa City, IA, USA.
Maurine NeimanDepartment of Biology, University of Iowa, Iowa City, IA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How does asexual reproduction influence genome evolution? Although is it clear that genomic structural variation is common and important in natural populations, we know very little about how one of the most fundamental of eukaryotic traits-mode of genomic inheritance-influences genome structure. We address this question with the New Zealand freshwater snail Potamopyrgus antipodarum, which features multiple separately derived obligately asexual lineages that coexist and compete with otherwise similar sexual lineages. We used whole-genome sequencing reads from a diverse set of sexual and asexual individuals to analyze genomic abundance of a critically important gene family, rDNA (the genes encoding rRNAs), that is notable for dynamic and variable copy number. Our genomic survey of rDNA in P. antipodarum revealed two striking results. First, the core histone and 5S rRNA genes occur between tandem copies of the 18S-5.8S-28S gene cluster, a unique architecture for these crucial gene families. Second, asexual P. antipodarum harbor dramatically more rDNA-histone copies than sexuals, which we validated through molecular and cytogenetic analysis. The repeated expansion of this genomic region in asexual P. antipodarum lineages following distinct transitions to asexuality represents a dramatic genome structural change associated with asexual reproduction-with potential functional consequences related to the loss of sexual reproduction.

Indexed as

GenomeHistonesAnimalsGenomicsHumansReproduction, AsexualSnailsHistonesasexual reproductiongenome evolutionhistone genes, repetitive sequenceribosomal RNA genes

Identifiers

PMID33885820
PMCPMC8382920

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.