Evidence map›Paper›PMID 33884952›Full record

ArticleeLife2021

Confinement discerns swarmers from planktonic bacteria.

Weijie Chen, Neha Mani, Hamid Karani, Hao Li, Sridhar Mani, Jay X Tang

Abstract readVideo-Audio Media
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Weijie ChenDepartment of Physics, Brown University, Providence, United States.ORCID 0000-0002-7105-5645
Neha ManiDepartment of Physics, Brown University, Providence, United States.
Hamid KaraniDepartment of Physics, Brown University, Providence, United States.
Hao LiDepartment of Medicine, Albert Einstein College of Medicine, Bronx, United States.
Sridhar ManiDepartment of Medicine, Albert Einstein College of Medicine, Bronx, United States.
Jay X TangDepartment of Physics, Brown University, Providence, United States.ORCID 0000-0002-1022-4337

Funding

Developmental PBDE exposure, gut microbiome, and diabetesR01ES030197 · NIEHS · UNIVERSITY OF WASHINGTON · PI Julia Yue Cui, Haiwei Gu · 2019 to 2026
$5.0M
Microbial Metabolite Mimics, PXR and Colitis-Induced Colorectal CancerR01CA222469 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI MANI, SRIDHAR · 2018 to 2022
$2.3M
NCI NIH HHS R01 CA222469NIEHS NIH HHS R01 ES030197
6 · The paper itself

Abstract

Powered by flagella, many bacterial species exhibit collective motion on a solid surface commonly known as swarming. As a natural example of active matter, swarming is also an essential biological phenotype associated with virulence, chemotaxis, and host pathogenesis. Physical changes like cell elongation and hyper-flagellation have been shown to accompany the swarming phenotype. Less studied, however, are the contrasts of collective motion between the swarming cells and their counterpart planktonic cells of comparable cell density. Here, we show that confining bacterial movement in circular microwells allows distinguishing bacterial swarming from collective swimming. On a soft agar plate, a novel bacterial strain

Indexed as

Gastrointestinal MicrobiomeMovementAnimalsBacterial LoadCluster AnalysisColitisComputer SimulationDextran SulfateDisease Models, AnimalEnterobacterFemaleFlagellaHost-Pathogen InteractionsIntestinal MucosaMiceMice, Inbred C57BLDextran SulfatebacteriaB. subtilisEnterobacter sp. SM3mousemucosalphysics of living systems

Identifiers

PMID33884952
PMCPMC8112864

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.