Evidence map›Paper›PMID 33881701›Full record

ArticlePlant molecular biology2021

Expression of peat moss VASCULAR RELATED NAC-DOMAIN homologs in Nicotiana benthamiana leaf cells induces ectopic secondary wall formation.

Shiori Terada, Minoru Kubo, Nobuhiro Akiyoshi, Ryosuke Sano, Toshihisa Nomura, Shinichiro Sawa, Misato Ohtani, Taku Demura

Abstract read
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In one paragraph

Article in Plant molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular biology of mosses.Plant molecular biology · 2021
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Shiori Terada *Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, 630-0192, Japan.
Minoru Kubo *Institute for Research Initiative, Nara Institute of Science and Technology, Ikoma, 630-0192, Japan. ku-bo@kumamoto-u.ac.jp.ORCID http://orcid.org/0000-0001-8691-6252
Nobuhiro AkiyoshiGraduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, 630-0192, Japan.
Ryosuke SanoGraduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, 630-0192, Japan.
Toshihisa NomuraRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan.ORCID http://orcid.org/0000-0002-6806-3708
Shinichiro SawaGraduate School of Science and Technology, Kumamoto University, Kumamoto, 860-8555, Japan.ORCID http://orcid.org/0000-0002-9309-9104
Misato OhtaniDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8561, Japan.ORCID http://orcid.org/0000-0001-5429-3310
Taku DemuraGraduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, 630-0192, Japan. demura@bs.naist.jp.ORCID http://orcid.org/0000-0002-2499-4738
Nara Institute of Science and Technology · JPThe University of Tokyo · JPKumamoto University · JPRIKEN Center for Sustainable Resource Science · JP

Funding

Japan Society for the Promotion of Science JP18H02466Japan Society for the Promotion of Science JP20K06669Japan Society for the Promotion of Science JP25291062Ministry of Education, Culture, Sports, Science and Technology JP18H05484Ministry of Education, Culture, Sports, Science and Technology JP18H05489Ministry of Education, Culture, Sports, Science and Technology JP24114002Nara Institute of Science and Technology Big Data ProjectNara Institute of Science and Technology Humanophilic Innovation Project
6 · The paper itself

Abstract

key messageThe homologs of VASCULAR RELATED NAC-DOMAIN in the peat moss Sphagnum palustre were identified and these transcriptional activity as the VNS family was conserved. In angiosperms, xylem vessel element differentiation is governed by the master regulators VASCULAR RELATED NAC-DOMAIN6 (VND6) and VND7, encoding plant-specific NAC transcription factors. Although vessel elements have not been found in bryophytes, differentiation of the water-conducting hydroid cells in the moss Physcomitrella patens is regulated by VND homologs termed VND-NST-SOMBRERO (VNS) genes. VNS genes are conserved in the land plant lineage, but their functions have not been elucidated outside of angiosperms and P. patens. The peat moss Sphagnum palustre, of class Sphagnopsida in the phylum Bryophyta, does not have hydroids and instead uses hyaline cells with thickened, helical-patterned cell walls and pores to store water in the leaves. Here, we performed whole-transcriptome analysis and de novo assembly using next generation sequencing in S. palustre, obtaining sequences for 68,305 genes. Among them, we identified seven VNS-like genes, SpVNS1-A, SpVNS1-B, SpVNS2-A, SpVNS2-B, SpVNS3-A, SpVNS3-B, and SpVNS4-A. Transient expression of these VNS-like genes, with the exception of SpVNS2-A, in Nicotiana benthamiana leaf cells resulted in ectopic thickening of secondary walls. This result suggests that the transcriptional activity observed in other VNS family members is functionally conserved in the VNS homologs of S. palustre.

Indexed as

Cell WallGene Expression ProfilingGene Expression Regulation, PlantHigh-Throughput Nucleotide SequencingNicotianaPlant LeavesPlant ProteinsPlants, Genetically ModifiedProtein DomainsSphagnopsidaTranscription FactorsXylemPlant ProteinsTranscription FactorsHyaline cellPeat mossSphagnum palustreVNDVNSWater-conductingWater storage

Identifiers

PMID33881701
OpenAlexW3153523076

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.