Evidence map›Paper›PMID 33879773›Full record

ArticleTranslational psychiatry2021

Utilization of machine learning for identifying symptom severity military-related PTSD subtypes and their biological correlates.

Carole E Siegel, Eugene M Laska, Ziqiang Lin, Mu Xu, Duna Abu-Amara, Michelle K Jeffers, Meng Qian, Nicholas Milton, Janine D Flory, Rasha Hammamieh and 13 more

Abstract read
In one paragraph

Article in Translational psychiatry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Observational
  7. Article
  8. Article
  9. Using machine learning algorithm to predict the risk of post-traumatic stress disorder among firefighters in Changsha.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2023
    Article
  10. Deriving psychiatric symptom-based biomarkers from multivariate relationships between psychophysiological and biochemical measures.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2022
    Article
  11. A General Iterative Clustering Algorithm.Statistical analysis and data mining · 2022
    Article
  12. Review
  13. Article
  14. Identifying subtypes of PTSD to promote precision medicine.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2022
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Carole E SiegelCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA. Carole.Siegel@nyulangone.org.ORCID 0000-0002-7460-788X
Eugene M LaskaCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Ziqiang LinCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0003-1990-6788
Mu XuCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Duna Abu-AmaraCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Michelle K JeffersCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Meng QianCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Nicholas MiltonCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.
Janine D FloryDepartment of Psychiatry, James J. Peters VA Medical Center, Bronx, NY, USA.
Rasha HammamiehMilitary Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Bernie J DaigleDepartments of Biological Sciences and Computer Science, The University of Memphis, Memphis, TN, USA.ORCID 0000-0003-3068-8662
Aarti GautamMilitary Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Kelsey R DeanDepartment of Systems Biology, Harvard University, Cambridge, MA, USA.
Victor I ReusDepartment of Psychiatry, University of California, San Francisco, CA, USA.
Owen M WolkowitzDepartment of Psychiatry, University of California, San Francisco, CA, USA.ORCID 0000-0003-0655-5042
Synthia H MellonDepartment of Obstetrics, Gynecology, & Reproductive Sciences, University of California, San Francisco, CA, USA.
Kerry J ResslerDepartment of Psychiatry, McLean Hospital, Belmont, MA, USA.ORCID 0000-0002-5158-1103
Rachel YehudaDepartment of Psychiatry, James J. Peters VA Medical Center, Bronx, NY, USA.
Kai WangInstitute for Systems Biology, Seattle, WA, USA.
Leroy HoodInstitute for Systems Biology, Seattle, WA, USA.
Francis J DoyleHarvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.
Marti JettMilitary Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.ORCID 0000-0002-2899-0216
Charles R MarmarCenter for Alcohol Use Disorder and PTSD, Department of Psychiatry, New York University Grossman School of Medicine, New York, NY, USA.

Funding

United States Department of Defense | U.S. Army (United States Army) W81XWH-18-C-0160United States Department of Defense | U.S. Army (United States Army) W911NF-17-1-0069
6 · The paper itself

Abstract

We sought to find clinical subtypes of posttraumatic stress disorder (PTSD) in veterans 6-10 years post-trauma exposure based on current symptom assessments and to examine whether blood biomarkers could differentiate them. Samples were males deployed to Iraq and Afghanistan studied by the PTSD Systems Biology Consortium: a discovery sample of 74 PTSD cases and 71 healthy controls (HC), and a validation sample of 26 PTSD cases and 36 HC. A machine learning method, random forests (RF), in conjunction with a clustering method, partitioning around medoids, were used to identify subtypes derived from 16 self-report and clinician assessment scales, including the clinician-administered PTSD scale for DSM-IV (CAPS). Two subtypes were identified, designated S1 and S2, differing on mean current CAPS total scores: S2 = 75.6 (sd 14.6) and S1 = 54.3 (sd 6.6). S2 had greater symptom severity scores than both S1 and HC on all scale items. The mean first principal component score derived from clinical summary scales was three times higher in S2 than in S1. Distinct RFs were grown to classify S1 and S2 vs. HCs and vs. each other on multi-omic blood markers feature classes of current medical comorbidities, neurocognitive functioning, demographics, pre-military trauma, and psychiatric history. Among these classes, in each RF intergroup comparison of S1, S2, and HC, multi-omic biomarkers yielded the highest AUC-ROCs (0.819-0.922); other classes added little to further discrimination of the subtypes. Among the top five biomarkers in each of these RFs were methylation, micro RNA, and lactate markers, suggesting their biological role in symptom severity.

Indexed as

Military PersonnelStress Disorders, Post-TraumaticVeteransDiagnostic and Statistical Manual of Mental DisordersHumansMachine LearningMale

Identifiers

PMID33879773
PMCPMC8058082

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.