Evidence map›Paper›PMID 33879573›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Specific modulation of the root immune system by a community of commensal bacteria.

Paulo J P L Teixeira, Nicholas R Colaianni, Theresa F Law, Jonathan M Conway, Sarah Gilbert, Haofan Li, Isai Salas-González, Darshana Panda, Nicole M Del Risco, Omri M Finkel and 4 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
27.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 166 citations in OpenAlex.

  1. Root colonization by beneficial rhizobacteria.FEMS microbiology reviews · 2024
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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Paulo J P L TeixeiraHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0002-0776-5044
Nicholas R ColaianniHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0001-5280-1852
Theresa F LawHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Jonathan M ConwayHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0002-2715-2149
Sarah GilbertHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0002-3458-1347
Haofan LiDepartment of Biology, Kenyon College, Gambier, OH 43022.
Isai Salas-GonzálezHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0002-0347-5058
Darshana PandaHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Nicole M Del RiscoHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
Omri M FinkelHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0003-4770-0402
Gabriel CastrilloHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0002-1557-6614
Piotr MieczkowskiDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0003-2418-0096
Corbin D JonesDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.ORCID 0000-0001-7281-7130
Jeffery L DanglHHMI, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599; dangl@email.unc.edu.
University of North Carolina at Chapel Hill · USKenyon College · US

Funding

Predoctoral Training Program in Bioinformatics and Computational BiologyT32GM135123 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Michael Isaiah Love, William Valdar · 2021 to 2026
$1.7M
NIGMS NIH HHS T32 GM135123
6 · The paper itself

Abstract

Plants have an innate immune system to fight off potential invaders that is based on the perception of nonself or modified-self molecules. Microbe-associated molecular patterns (MAMPs) are evolutionarily conserved microbial molecules whose extracellular detection by specific cell surface receptors initiates an array of biochemical responses collectively known as MAMP-triggered immunity (MTI). Well-characterized MAMPs include chitin, peptidoglycan, and flg22, a 22-amino acid epitope found in the major building block of the bacterial flagellum, FliC. The importance of MAMP detection by the plant immune system is underscored by the large diversity of strategies used by pathogens to interfere with MTI and that failure to do so is often associated with loss of virulence. Yet, whether or how MTI functions beyond pathogenic interactions is not well understood. Here we demonstrate that a community of root commensal bacteria modulates a specific and evolutionarily conserved sector of the

Indexed as

ArabidopsisArabidopsis ProteinsBacteriaGene ExpressionGene Expression Regulation, PlantImmunityMicrobiotaPlant DiseasesPlant ImmunityPlant RootsPlantsSoil MicrobiologySymbiosisVirulenceArabidopsis Proteinsflg22MAMPplant immunityroot microbiomeSynCom

Identifiers

PMID33879573
PMCPMC8072228
OpenAlexW3154971795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.