Evidence map›Paper›PMID 33879459›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2021

Global Phosphoproteomics Reveal CDK Suppression as a Vulnerability to KRas Addiction in Pancreatic Cancer.

Aslamuzzaman Kazi, Liwei Chen, Shengyan Xiang, Rajanikanth Vangipurapu, Hua Yang, Francisca Beato, Bin Fang, Terence M Williams, Kazim Husain, Patrick Underwood and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  8. Omics-based molecular classifications empowering in precision oncology.Cellular oncology (Dordrecht, Netherlands) · 2024
    Review
  9. Article
  10. Article
  11. Functional and Clinical Proteomic Exploration of Pancreatic Cancer.Molecular & cellular proteomics : MCP · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in cell and developmental biology · 2023
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Aslamuzzaman Kazi *Department of Drug Discovery, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Liwei Chen *Department of Drug Discovery, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.ORCID 0000-0003-1929-1330
Shengyan XiangDepartment of Drug Discovery, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Rajanikanth VangipurapuDepartment of Drug Discovery, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.ORCID 0000-0003-0676-3140
Hua YangDepartment of Drug Discovery, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Francisca BeatoDepartment of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Bin FangProteomics and Metabolomics Core, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Terence M WilliamsDepartment of Radiation Oncology, The Ohio State University, Columbus, Ohio.ORCID 0000-0002-1020-0845
Kazim HusainDepartment of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Patrick UnderwoodDepartment of Surgery, University of Florida, Gainesville, Florida.ORCID 0000-0002-8267-8979
Jason B FlemingDepartment of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Mokenge MalafaDepartment of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.
Eric A WelshBiostatistics and Bioinformatics Shared Resource, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.ORCID 0000-0002-9302-3855
John KoomenMolecular Oncology Department, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.ORCID 0000-0002-3818-1762
José TrevinoDepartment of Surgery, University of Florida, Gainesville, Florida.
Saïd M SebtiDepartment of Drug Discovery, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida. said.sebti@vcuhealth.org.
Moffitt Cancer Center · USUniversity of Florida · USThe Ohio State University · US

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI Christine O'Connell · 1998 to 2026
$93.5M
Tissue Modeling & Drug Development Shared Resources CoreU54CA233444 · NCI · UNIVERSITY OF FLORIDA · PI Chanita A. Hughes-Halbert, Sulma Ibrahim Mohammed · 2018 to 2026
$12.1M
Targeting Mutant KRAS for Cancer TherapyR35CA197731 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI SEBTI, SAID M · 2016 to 2022
$6.2M
Use of BCL-xL Proteolysis targeting chimeras to treat pancreatic cancerR01CA242003 · NCI · UNIVERSITY OF FLORIDA · PI TREVINO, JOSE G., ZHENG, GUANGRONG · 2019 to 2023
$2.6M
NCI NIH HHS P30 CA076292NCI NIH HHS R01 CA242003NCI NIH HHS R35 CA197731NCI NIH HHS U54 CA233444
6 · The paper itself

Abstract

purposeAmong human cancers that harbor mutant (mt) KRas, some, but not all, are dependent on mt KRas. However, little is known about what drives KRas dependency. EXPERIMENTAL

designGlobal phosphoproteomics, screening of a chemical library of FDA drugs, and genome-wide CRISPR/Cas9 viability database analysis were used to identify vulnerabilities of KRas dependency.

resultsGlobal phosphoproteomics revealed that KRas dependency is driven by a cyclin-dependent kinase (CDK) network. CRISPR/Cas9 viability database analysis revealed that, in mt KRas-driven pancreatic cancer cells, knocking out the cell-cycle regulators CDK1 or CDK2 or the transcriptional regulators CDK7 or CDK9 was as effective as knocking out KRas. Furthermore, screening of a library of FDA drugs identified AT7519, a CDK1, 2, 7, and 9 inhibitor, as a potent inducer of apoptosis in mt KRas-dependent, but not in mt KRas-independent, human cancer cells.

conclusionsA link between CDK hyperactivation and mt KRas dependency was uncovered and pharmacologically exploited to abrogate mt KRas-driven pancreatic cancer in highly relevant models, warranting clinical investigations of AT7519 in patients with pancreatic cancer.

Indexed as

AnimalsCyclin-Dependent KinasesHumansMicePancreatic NeoplasmsPhosphorylationProteomeProto-Oncogene Proteins p21(ras)Cyclin-Dependent KinasesHras protein, mouseKRAS protein, humanProteomeProto-Oncogene Proteins p21(ras)

Identifiers

PMID33879459
PMCPMC8493485
OpenAlexW3156892559

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.